KEGG   Aquimarina sp. ERC-38: NBT05_14645
Entry
NBT05_14645       CDS       T09583                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
aqe  Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:aqe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqe03032]
    NBT05_14645
   03036 Chromosome and associated proteins [BR:aqe03036]
    NBT05_14645
   03400 DNA repair and recombination proteins [BR:aqe03400]
    NBT05_14645
DNA replication proteins [BR:aqe03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    NBT05_14645
Chromosome and associated proteins [BR:aqe03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    NBT05_14645
DNA repair and recombination proteins [BR:aqe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      NBT05_14645
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg Arteri_nsp7a VWA_2
Other DBs
NCBI-ProteinID: UZO80180
LinkDB
Position
3503161..3503433
AA seq 90 aa
MNKTELIDAMAEDAGITKAAAKKALESFLGNVQKSLKKGDRISLVGFGSWSVSKRAAREG
RNPQTGKTIKIAAKNVVKFKAGADLSGAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaacagaattaattgatgcaatggcagaagatgcgggaatcacaaaggccgcc
gcaaaaaaagcattggaatcatttttaggaaatgtacagaaatctcttaagaagggagat
cgtatttctttagtaggtttcggatcttggtcagtatcaaaaagagctgcgagagaagga
agaaaccctcaaaccggtaaaactatcaaaatcgctgctaaaaatgtagttaaatttaaa
gcaggtgcagatctatcaggagctgtaaactag

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