Aquimarina sp. ERC-38: NBT05_14645
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Entry
NBT05_14645 CDS
T09583
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aqe
Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqe03032
]
NBT05_14645
03036 Chromosome and associated proteins [BR:
aqe03036
]
NBT05_14645
03400 DNA repair and recombination proteins [BR:
aqe03400
]
NBT05_14645
DNA replication proteins [BR:
aqe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NBT05_14645
Chromosome and associated proteins [BR:
aqe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NBT05_14645
DNA repair and recombination proteins [BR:
aqe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NBT05_14645
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Arteri_nsp7a
VWA_2
Motif
Other DBs
NCBI-ProteinID:
UZO80180
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All DBs
Position
3503161..3503433
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDAMAEDAGITKAAAKKALESFLGNVQKSLKKGDRISLVGFGSWSVSKRAAREG
RNPQTGKTIKIAAKNVVKFKAGADLSGAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagaattaattgatgcaatggcagaagatgcgggaatcacaaaggccgcc
gcaaaaaaagcattggaatcatttttaggaaatgtacagaaatctcttaagaagggagat
cgtatttctttagtaggtttcggatcttggtcagtatcaaaaagagctgcgagagaagga
agaaaccctcaaaccggtaaaactatcaaaatcgctgctaaaaatgtagttaaatttaaa
gcaggtgcagatctatcaggagctgtaaactag
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