Aquimarina sp. ERC-38: NBT05_14740
Help
Entry
NBT05_14740 CDS
T09583
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aqe
Aquimarina sp. ERC-38
Pathway
aqe03030
DNA replication
aqe03430
Mismatch repair
aqe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NBT05_14740
03430 Mismatch repair
NBT05_14740
03440 Homologous recombination
NBT05_14740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqe03032
]
NBT05_14740
03400 DNA repair and recombination proteins [BR:
aqe03400
]
NBT05_14740
Enzymes [BR:
aqe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NBT05_14740
DNA replication proteins [BR:
aqe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NBT05_14740
DNA repair and recombination proteins [BR:
aqe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NBT05_14740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
Rad17
AAA_14
TIP49
AAA_30
AAA_5
AAA_16
RCF1-5-like_lid
AAA_24
DNA_pol3_delta_C
DUF815
AAA_assoc_2
AAA_7
nSTAND3
NPHP3_N
DNA_pol3_gamma3
AAA_18
RNA_helicase
Mg_chelatase
AAA_2
Sigma54_activ_2
NACHT
Cmr2_hel_dom1
Motif
Other DBs
NCBI-ProteinID:
UZO80198
LinkDB
All DBs
Position
3525227..3527047
Genome browser
AA seq
606 aa
AA seq
DB search
MEHFIVSARKYRPQTFEDVVGQQAITNTLLNAIKNDHLAQALLFTGPRGVGKTSCARILA
KTINQDGTTQEDEDFAFNIFELDAASNNSVDDIRSLIEQVRIPPQVGTYKVYIIDEVHML
SQAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVTEAKNHLLKVA
ESEGIEADEEALHIIAQKADGAMRDALSIFDRVVSYSGKKLTRQAVTENLNVLDYETYFV
TTDLLLSNNIPQLLLSFNEVLSKGFDGHHFIAGLASHFRDLLVCKNPETIKLLEVGDQTK
KKYYEQSKEADTSFLLKGINLANDCDLKYKSSRNQRLLVELCLMQLASITQPGYGEKKKD
DAYIIPASYFRNNKVKGIEKTKEVLSEERLDKKESIISEQQEAVVLSEPKVSYSENVEKP
KPMENQVVSVPTQEVAPSIVPQKVINPANLSVNKKKTSGLSLSSIRKKKEHQNSKVQEIV
DPRNLPEKEFTETDLKNAWLTYGKMQERKGEMIVGSMFAMNIPEKNGNQIILELPNHSMK
ADLEQIQNSFLQYIYKELNNYKVELVINVNEEVSKKYAFTPQDKYEKLKEKNPLIDKLRS
EFDLDI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggagcattttatcgtttctgcaagaaaatacaggcctcaaacttttgaagatgttgtt
ggacagcaagcaattaccaatactttattaaatgctataaaaaacgatcacctcgcgcag
gcattgttgtttacgggtccacgtggtgttggtaaaacctcctgtgcccgtattctagca
aaaactattaaccaagacggtactacccaagaagatgaagattttgcctttaatattttt
gagttggatgcggcttctaacaactcggtggatgatatccgtagtttgatcgagcaggtt
cgtattccgccgcaggtgggaacctataaagtatatattatagatgaggtacatatgctt
tcgcaagcagctttcaatgcctttttaaaaactttagaagaacctccaaaacatgctatt
tttattttagctactacagagaaacataaaattattccgaccattctctcccgttgtcag
atttttgactttaaaaggattacggttactgaagctaaaaaccacttattgaaggtggct
gaaagcgaaggtattgaagctgatgaagaagctcttcatataattgcacagaaagcggat
ggtgctatgcgggacgcactttctatatttgaccgggtggttagttatagcgggaaaaaa
ttaacgcgacaagcagttacggagaaccttaatgttctggattacgaaacttattttgtt
accacggatttattgctttctaataacattccgcagttactactttcttttaacgaagta
cttagcaaaggttttgacggacatcattttattgccggattagcgtcccactttcgtgat
ttattagtttgtaagaacccagaaactattaaacttctggaagttggagatcagactaaa
aagaagtattacgaacaatccaaagaagcagacacttctttcttacttaaaggaattaat
ttagccaatgattgcgatctaaagtataaatccagtcgaaaccaaagactcttagtcgaa
ttatgcctgatgcaattagcctctattacccaacctggttatggagaaaaaaaaaaggat
gatgcctacataattccagcaagttactttcgaaacaataaagttaaaggaattgagaaa
acgaaggaagttttatcagaagaaagacttgataaaaaagagtcgattatctctgaacag
caagaagcagttgtactaagtgaacccaaagtatcctacagtgagaacgtagaaaaacca
aaacctatggaaaatcaagtagtatcggtaccaacgcaagaagtggctccttcaatcgta
ccgcaaaaagttattaatccagcaaatctttctgtaaataaaaagaaaacttccggtttg
tctttgagtagcattcggaaaaaaaaagagcaccaaaacagtaaagtacaagaaattgtt
gacccaagaaatcttcctgaaaaggaatttactgaaacagaccttaaaaatgcatggctt
acttatggtaagatgcaggaacgaaagggtgaaatgatcgtaggttctatgtttgctatg
aatatcccggaaaaaaatggcaatcaaattattttagaacttcctaatcattccatgaaa
gcggatttggaacaaattcaaaactcctttttacaatacatttacaaggagttaaataat
tataaggttgaacttgttattaatgtaaatgaagaagtttctaaaaaatacgcttttacc
ccgcaggataaatatgaaaaactaaaagaaaaaaatcctttgatcgataaacttagatct
gaattcgatttggatatttaa
DBGET
integrated database retrieval system
