Aquimarina sp. ERC-38: NBT05_16360
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Entry
NBT05_16360 CDS
T09583
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
aqe
Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqe03400
]
NBT05_16360
DNA repair and recombination proteins [BR:
aqe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NBT05_16360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_16
AAA_10
FtsK_SpoIIIE
AAA_22
AAA
TrwB_AAD_bind
ResIII
AAA_30
CbiA
AAA_7
AAA_19
Zot
AAA_6
TraG-D_C
SRP54
Hydrolase
P-loop_TraG
Zeta_toxin
AAA_18
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UZO80510
LinkDB
All DBs
Position
3939820..3941346
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AA seq
508 aa
AA seq
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MSKTQEFFDTIETGYATQGEAITLGAAMLEGKTLTNTFVKVPLKTMNRHGLIAGATGTGK
TKTLQVLAENLSKNGVPVLLMDIKGDLSGLAAASPGHKKIDERHAEIGIPFEAHKFPVEL
LSLSDQDGVRLRATVSEFGPVLFSRILDVTETQAGIIAIIFKYCDDHQLPLLDLKDLKKV
LQFVTNEGRKEIEKDYGRISSASTGSILRKIVALEQQGADLFFGERSFDVDDLRRITEDG
EGFINIIRLTDIQDKPKLFSTFMLSLLAEVYNTFPEQGDSDRPELVIFLDEAHLIFKEAS
NALMDQIESMVKLIRSKGVGLYFVTQNPTDVPEGILGQLGLKIQHALRAFTAKDRKAIKL
TAENYPDSEYYDTKEALTSLGIGEALISVLNEKGRPTPLAMTLLRAPMSRMDILTDSEIK
EVLDESSLIKKYNETIDRESAYELLNEKIEKAEAEEAKIAAQKEREKIEKNTRAKKSTTS
STEKAVVKVLTSATFIRGALGILNKFLK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaacacaggaattttttgatactatagaaacgggatatgcaacacaaggagaa
gctattaccctgggagctgccatgcttgaaggtaaaacgctgaccaatacttttgtaaaa
gtccctttaaaaaccatgaatcgacatggtttaattgcaggtgctaccggaaccggaaag
accaaaaccctacaggtactggcagaaaatctaagtaagaacggtgtacctgttctactg
atggatattaaaggagacctaagcggattagcagccgcaagtccgggccataaaaaaatt
gatgaaagacacgcagaaatcggaattccttttgaagcccataaatttccagtggaactc
ctttctttatctgatcaggatggtgttaggttacgggctaccgttagcgaattcggacct
gtgttattctcaagaattctggatgttacggaaacgcaggcggggatcattgctattatt
tttaaatattgcgatgatcatcaactaccattactggatttaaaagatcttaaaaaggta
cttcaattcgtcacaaacgaagggcgtaaagagattgaaaaagactacggacgtatttct
tctgcttctaccggttcgatccttcgtaagatagttgctctggaacagcagggtgctgac
cttttttttggagagagatcatttgatgttgatgatttacgacgcattaccgaagatggt
gaaggttttattaatattatccgtttaacagatatacaggataagcctaaactattctca
acatttatgttgagcctgctggcagaagtatacaacacctttccggagcagggagacagt
gatcgtccggagcttgtcatctttctggacgaagcgcatcttatctttaaagaagcttct
aatgccttaatggatcagattgaaagtatggtaaaattaatccgatcaaaaggagtagga
ttatactttgttactcaaaatcctacggatgtcccggaaggtattctaggacagttaggc
ttaaaaattcagcatgcgctacgggcttttacagcaaaagatcggaaagctatcaagtta
accgcagaaaattatcctgattcggaatattatgatactaaggaagctttgacttctctg
ggaatcggtgaagcacttatctcggtattaaacgaaaaaggaagacccaccccccttgca
atgacattattacgtgcccccatgagccgaatggatattttgactgatagtgagataaaa
gaagtacttgatgaatccagtttgatcaaaaagtataatgaaaccattgatcgggaaagc
gcctatgaattattaaatgaaaagattgaaaaagcagaagctgaagaggctaagatcgca
gctcaaaaggaaagggaaaaaatagagaaaaatacaagagcaaaaaagagtaccacttct
tcaaccgagaaagccgtagttaaagtgttgaccagtgctacttttatcaggggagcttta
ggtattctgaataaatttctaaaataa
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