Aquabacter sp. L1I39: J5J86_04200
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Entry
J5J86_04200 CDS
T10434
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi03030
DNA replication
aqi03430
Mismatch repair
aqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5J86_04200
03430 Mismatch repair
J5J86_04200
03440 Homologous recombination
J5J86_04200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqi03032
]
J5J86_04200
03400 DNA repair and recombination proteins [BR:
aqi03400
]
J5J86_04200
Enzymes [BR:
aqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5J86_04200
DNA replication proteins [BR:
aqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5J86_04200
DNA repair and recombination proteins [BR:
aqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5J86_04200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QTL06022
LinkDB
All DBs
Position
complement(954489..955484)
Genome browser
AA seq
331 aa
AA seq
DB search
MNLDEGEAVHKPRRRARTAAVRPAPEPVAPPVPEIAYDAQYEAWACELERTGRYRILRRL
EFPPVVSRPLKAGEKLAVIIDTETTGLDPAKEEVIELGMVAFAYGEDGAVGDVIATYSQL
REPSVPISAEITKLTGITPEMVKGHALDLDEVASFIAPAALVIAHNARFDRPFCERLLPD
FAHKAWACSASQVDWSGFGFEGVKLGYLVGQSGWFHNGHRAVDDCQALLAVLGAPLKEAE
GIAFSRLLATARQPTFRVWAESAPFDMKDHLKKRGYRWNDGSDGRPKSWWIEVPETGLAD
ELAYLKAEIYLREVDLLVQKITAFERFRPGV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggacgagggcgaggcggtgcataagccccgccgccgcgcccgcacggccgcc
gtgcgccccgcgcccgagcccgtcgcgccgccggtgcccgaaatcgcctatgacgcgcaa
tacgaggcctgggcctgcgagctggagcgcaccgggcgctatcgcatcctgcgccgcctg
gaattcccgcccgtggtgtcccggccgctcaaggcgggggagaagctcgccgtcatcatc
gacaccgagaccaccgggctcgaccccgccaaggaagaggtgatcgagctgggcatggtg
gccttcgcctatggggaggatggcgcggtgggcgatgtgatcgccacctacagccagctt
cgcgagccctccgtgcccatcagcgccgagatcaccaagctcaccggcatcacgccggag
atggtgaagggccatgcgctggatctggacgaagtcgccagtttcatcgcgcccgccgcc
cttgtgatcgcccacaatgcccggttcgaccggcccttctgcgagcgcctgctgccggac
ttcgcccacaaggcctgggcctgctcagccagccaggtggactggtcgggcttcgggttc
gagggggtgaagctgggctatctggtgggccagtccggctggtttcacaatggccaccgg
gccgtagacgattgccaggcgctgctcgccgtgctcggcgcgcccttgaaggaagcggag
ggcatcgccttttcccggctgctggccaccgcccgccagcccaccttccgcgtctgggcg
gaaagcgcgcccttcgacatgaaggaccatctgaagaagcgcggctatcgctggaatgac
ggctccgacgggcggcccaaatcctggtggatcgaggtgccggagacggggctggcggac
gagctggcttatctgaaggccgagatctatctgcgcgaggtggacctcctggtccagaag
atcaccgccttcgagaggtttcggccgggggtgtga
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