Aquabacter sp. L1I39: J5J86_07505
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Entry
J5J86_07505 CDS
T10434
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aqi Aquabacter sp. L1I39
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aqi03016
]
J5J86_07505 (truB)
Enzymes [BR:
aqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J5J86_07505 (truB)
Transfer RNA biogenesis [BR:
aqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5J86_07505 (truB)
Prokaryotic type
J5J86_07505 (truB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QTL05130
LinkDB
All DBs
Position
1730955..1732064
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AA seq
369 aa
AA seq
DB search
MPIADDRSPEQDDGHDAAQDTAVLTPATAPASDYDRPRYKRAGEPPRRPQRDPNKPREPK
RDIDGWVLLDKPIGMTSTQAVTVVKRLFGAKKAGHAGTLDPLASGCLPIAFGEATKTVPY
VMDGRKTYRFTVCFGIEMDTDDAEGSPVATSDVRPADAEIEAALDQFRGEIMQVPPVYSA
LKIQGERAYDLAREGETVVLEARPVVIHRLEIVSRPDADHVVIEAECGKGTYVRSIARDL
GRALGTCGHVSTLRRTAVGPFLEEDLVPLDELRDRADAGMPALSEAMADVGCALEELPEI
AVTPSDAHRMRCGQNVILRGRDAPIYEGHVAVSCQGSLIAIGDMAGGEVRPHRVFNWAKS
APKPMRRSA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgccgatgaccgctccccggagcaagatgacggccacgacgccgcacaggac
accgccgtcttgactccggccactgcgcccgcgtcggactatgaccggccgcgctacaag
cgcgccggtgagccgccgcgccgcccccagcgcgaccccaacaagccgcgcgagcccaag
cgcgacattgacggctgggttctgctggacaagcccatcggcatgacctccacccaggcg
gtcaccgtggtgaagcgcctgttcggcgccaagaaggccggccatgcgggcacgctggat
ccgctggcgtccggctgcctgcccatcgccttcggcgaggccaccaagaccgtcccctat
gtgatggacggccgcaagacctatcgcttcaccgtgtgcttcggcatcgagatggacacc
gatgacgcggaaggctcgcccgtcgcgacctccgatgttcgccccgccgacgccgagatc
gaagcggcgctcgaccagttccgcggcgagatcatgcaagtgccgccggtctattctgcg
ctcaagatccagggcgagcgcgcctatgatctggcccgggagggcgagaccgtggtgctg
gaggcccgccccgtggtgattcaccgcctggaaatcgtgtcccgtccggacgccgaccat
gtcgtgatcgaggccgagtgcggcaagggcacctatgtgcgctccatcgcccgcgacctc
ggccgggcgctgggcacctgcggccatgtctcgaccttgcgtcgcaccgccgtcggcccg
ttcctggaggaggacctcgttcccctcgacgagctgcgcgaccgcgccgatgcgggcatg
cccgctttgtccgaggccatggcggacgtgggctgcgccttggaggaactgccggagatc
gccgtcaccccgtccgatgcgcaccgcatgcgctgcggccagaacgtaatcctgcgtggg
cgcgatgcgcccatctatgaggggcatgtggcggtgtcctgccagggctcgctgattgcc
atcggcgacatggcgggcggcgaggttcggccacatcgtgtattcaattgggccaagtct
gcgcccaagcccatgcgccggtctgcctga
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