Aquabacter sp. L1I39: J5J86_11635
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Entry
J5J86_11635 CDS
T10434
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi03420
Nucleotide excision repair
aqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5J86_11635
03430 Mismatch repair
J5J86_11635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqi03400
]
J5J86_11635
Enzymes [BR:
aqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5J86_11635
DNA repair and recombination proteins [BR:
aqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5J86_11635
MMR (mismatch excision repair)
Other MMR factors
J5J86_11635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_11
Tudor_1_RapA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QTL05884
LinkDB
All DBs
Position
complement(2645786..2648215)
Genome browser
AA seq
809 aa
AA seq
DB search
MRDENRSLSIPADPKGPLARGTVEAPAPRPGGIAERARAGAAPARPYLAGLNPEQRAAVE
TVDGPVLVLAGAGTGKTRVLTTRIAHILATGRAFPSQILAVTFTNKAAREMKERIHSMVG
DAVEGMPWLGTFHSIGVRILRRHCELVGLKSSFTILDTDDQIRLLKQLLAAESIDEKRWP
ARLLAATIDGWKNRGLSPEHVPAGEGSAFANGRGKSLYAAYQARLKALNAVDFGDLLLEG
IRLFREHPDVLADYHRRFKYLLVDEYQDTNVAQYLWLRLLAQGSRNVCCVGDDDQSIYGW
RGAEVDNILRFESDFPGATVIRLERNYRSTGHILGAAAHVIANNEGRLGKTLFSEGEMGE
KVAVTGAWDSGEEARAIGDEIEALSRAGHPLSQVAILVRASFQMREFEDRFVTLGLPYRV
IGGPRFYERAEIRDALAYLRCVLSAADDLAFERIVNVPKRGIGDATVKQIHDVARAAAVP
LQDAARVLTESEELKPKVRGTLRGLLQSFDRWREQARALPHTELAEIVLDESGYTEMWQK
DRSAEAAGRLENLKELIRSMEGFENLQGFLEHISLVMDVDNGAGEDAVQVMTLHSAKGLE
FDTVFLPGWEEGLFPHQRALDEQGKAGLEEERRLAYVGLTRARASARVYFASNRRIHGMW
NSTVPSRFLDELPDAHVEVQESRGGFGWGGSSYGQSRFDRAATVEPFSSSTYSTPGWGRA
QAARGSGGGSGFSERGSSYGRTGGSRGTVIEGALVASSTGVESAFKLGERVFHIKFGYGT
VREVDGNKLTVDFEKAGEKRVLDSFLDKP
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacgagaaccgttctttgtccattcctgccgatcctaagggcccccttgcacgg
ggcaccgtcgaggcccccgccccccgccctggcggcattgccgagcgcgcgcgagcgggc
gcggctccggcgcggccctatctggccggcctcaatcccgagcagcgggcggcggtggag
acggtggacggcccggttctggtgctggcgggcgccggcaccggcaagacgcgcgttctg
accacccgcatcgcccatatcctggccaccggccgcgccttcccctcgcagatcctcgcc
gtgaccttcaccaacaaggccgcgcgcgagatgaaggagcgcatccattccatggtgggc
gacgccgtggagggcatgccctggctcggcaccttccattccatcggcgtgcgcatcctg
cgccggcattgcgagctggtggggctgaaaagcagcttcaccatcctcgacaccgacgac
cagatccgcctgctgaagcaattgctggccgccgagagcatcgacgagaagcgctggccg
gcgcgtctgctggccgccaccatcgacggctggaagaatcgcggcctctcgcccgagcac
gtgccggcgggcgagggctccgccttcgccaatggccggggcaagagcctttatgccgcc
tatcaggcgcggctgaaggcgcttaacgcggtggatttcggcgacctgctcctggagggc
atccgcctgttccgcgagcatccggacgtgctggccgattatcaccggcggttcaaatat
ctgctggtggacgagtaccaggacaccaacgtcgcccaatatctgtggctgcgcctgctg
gcgcagggctcgcgcaatgtgtgctgcgtgggcgatgacgaccagtccatctatggctgg
cgcggcgcggaagtggacaacatcctgcgcttcgagagcgattttcccggcgccaccgtc
atccgcctggagcgcaattaccgctccacgggccatattctcggcgccgccgcccatgtg
atcgccaacaatgagggccggctcggcaagacgctcttctccgaaggagagatgggcgag
aaggtggcggtgaccggcgcctgggattcgggcgaggaagcccgcgccatcggcgacgag
atcgaggcgctcagccgcgccggccatcccctctcccaggtggccatcctggtgcgcgcc
tccttccagatgcgcgagttcgaggatcgcttcgtcacgctcggcctgccctatcgcgtc
attgggggcccgcgcttctatgagcgcgcggaaatccgcgatgcgctggcctatctgcgc
tgcgtgctctccgccgccgacgacctcgccttcgagcgaatcgtgaacgtgcccaagcgc
ggcatcggggatgccaccgtcaagcagatccacgatgtcgcccgcgccgccgcagtgccc
ctgcaggacgccgcccgggtgctgaccgagagcgaggaattgaagcccaaggtgcgcggc
accttgcgcggcctcctccaatccttcgaccgctggcgcgagcaggcccgcgccttgccg
cacaccgaactggccgagatcgtcctcgacgagagcggctatacggagatgtggcagaag
gaccgctccgccgaggcggcgggacggctggaaaacctcaaagaactgatccgctccatg
gaggggttcgagaatctccagggcttcctggagcacatctccctcgtcatggacgtggac
aatggcgccggcgaggacgccgtgcaggtgatgacgctgcattccgccaaggggctggaa
ttcgacaccgtcttcctgcccggctgggaagagggcctcttcccccaccagcgggcgctg
gacgagcagggcaaggcgggcctcgaggaagagcggcgcctggcctatgtgggcctcacc
cgggcgcgggcgagcgcgcgggtctatttcgcctccaaccggcgcattcacggcatgtgg
aattccaccgtgcccagccgtttcctggacgaactgcccgacgcccatgtggaagtgcag
gaatcgcgcggcggcttcggctggggcggctcctcctatggccagagccggtttgatcgc
gcggccaccgtggagcccttctcctcctccacctattccacccccggctggggccgcgcc
caggcggcgcggggctccggcggcgggtcaggcttttccgaacgggggtccagctatggc
cgcaccggtggatcgcgcggcacggtgatcgagggggcgctggtggcctcctccaccggc
gtcgaatccgcgttcaagctgggcgagcgggtgttccacattaagttcggctacggcacc
gtgcgcgaggtggacggcaacaagctcaccgtcgacttcgagaaggccggcgagaagcgc
gtattggacagcttcctcgacaagccctga
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