Aquabacter sp. L1I39: J5J86_12505
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Entry
J5J86_12505 CDS
T10434
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
J5J86_12505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqi03400
]
J5J86_12505
DNA repair and recombination proteins [BR:
aqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
J5J86_12505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QTL01642
LinkDB
All DBs
Position
complement(2816433..2817248)
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AA seq
271 aa
AA seq
DB search
MAPRTFWKGYLKLSLVTCPVAMTPATTESAKVRFHTLNRATGNRVVSEYVDAVSGKVVED
DGLARGYRTGEDSHVIVEDEELEAVALENRRTLDIEMFVPADSIGWIFLDRPHFLTPDGK
VGEEAYCVIRDAMDATGQVGISRLILHGREHAVMLAPREGGIVVWTLRYGDEVRDPQEVF
DAIGKASPDAKAMKLMTALIDERTRDWSPDFVSDPVQAKLLDIIAGKKTKKPRKPSKAAP
APKEGDGDNVVDIMEALRRSIAGEKSGKRKG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcgcaccttctggaagggctatctgaagctctcgctcgtcacttgcccggtg
gccatgacgccagccaccacggagagcgccaaggtgcgcttccacaccttgaaccgcgcc
acgggcaatcgcgtggtcagcgagtatgtggacgcagtgtcgggcaaggtggtggaagat
gacggcctcgcgcgcggctatcgcaccggcgaggacagccatgtgatcgtggaggacgag
gagctggaagccgtggcgctggagaataggcgcaccctcgacatcgagatgttcgtgccc
gccgacagcatcggctggatctttctcgaccgcccccatttcctcacccccgacggcaaa
gtgggcgaggaagcctattgcgtcatccgcgatgccatggacgccaccggccaagtgggc
atttcccgcctcatcctccatggccgcgagcatgcggtgatgctcgccccgcgcgagggc
gggattgtggtgtggaccttgcgctatggcgacgaggtgcgcgacccgcaggaggtgttc
gatgccatcggcaaggcctccccggacgccaaggccatgaaactcatgacggcgctgatt
gacgaacgcacccgcgactggagcccggatttcgtctctgatcccgtgcaggccaagctc
ttggacattatcgccggcaagaagaccaaaaagccgcgcaagccctccaaggccgctccc
gcgccgaaggagggggacggcgacaatgtggtcgacatcatggaagcgctgcgccggagc
attgcgggcgaaaagtccggcaagcgcaagggatga
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