Aquabacter sp. L1I39: J5J86_13590
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Entry
J5J86_13590 CDS
T10434
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aqi Aquabacter sp. L1I39
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqi03021
]
J5J86_13590 (rpoH)
Transcription machinery [BR:
aqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J5J86_13590 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_11
Sigma70_r3
KORA
Sigma70_r4_2
GntR
HTH_19
HTH_28
PgaD
HTH_PafC
HTH_15
UCR_14kD
NirdL-like_HTH
Peptidase_M78
DUF3431
Motif
Other DBs
NCBI-ProteinID:
QTL01840
UniProt:
A0A975DLS5
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All DBs
Position
3051358..3052260
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AA seq
300 aa
AA seq
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MATARHMPIPSAEGGLSRYLEEIRRFPMLEPQEEYMLAKSWREHGDRDAAHRLVTSHLRL
VAKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPDKGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTAAQKKLFFNLRKAKSQISALEEGDLRPDQVKQIATKLGVTEDEVVEMNRRL
GGDASLNAPLRDDGDSGEWQDWLVDERDDQENALAEQEEMDNRRTALAGALSVLNDRERR
IFEARRLAEDPVTLEELAAEFGVSRERVRQIEVRAFEKVQKAVVDRVRSLEEPTAETEPA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcacgccacatgcccattccgtccgcagagggcggtctgtcgcgctatctc
gaggagatccggcggttccccatgttggagccgcaggaggaatatatgctggccaagagc
tggcgcgagcatggggatcgcgatgcggcccatcggctcgtcaccagccatctgcgcctc
gtggcgaagatcgccatgggctatcgcggctatggcctgcccatttccgaagtgatctcc
gagggcaatgtgggcctcatgcaggcggtgaagcggttcgagcccgacaagggcttccgc
ctcgccacttatgccatgtggtggatccgcgcctcgattcaagaatatatcttgcggtcg
tggagcctcgtgaagatgggcaccacggcggcgcagaagaagctgttcttcaacctgcgc
aaggccaagagccagatctcggcgctggaggagggcgacctgcgccccgaccaggtcaag
cagatcgccaccaagctgggcgtcaccgaggacgaggtggtggagatgaaccgccgcctc
ggcggcgacgcctccctgaacgccccgctgcgcgacgatggcgacagcggtgagtggcag
gactggctggtggacgagcgcgatgaccaggaaaacgcgctcgccgagcaggaggagatg
gacaatcgccgcacggctctggccggcgcgctgtccgtgctcaatgaccgcgagcgtcgc
atcttcgaggcccgccgcctcgccgaggacccggtgaccctggaagaactggccgccgaa
ttcggcgtctcccgcgagcgcgtccgccagatcgaggtgcgcgccttcgagaaggtgcag
aaggcggtggtggaccgcgtccgctccctggaagagcccacggcggagaccgagccggcc
tga
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