Aquabacter sp. L1I39: J5J86_14340
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Entry
J5J86_14340 CDS
T10434
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J5J86_14340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqi03400
]
J5J86_14340
Enzymes [BR:
aqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5J86_14340
DNA repair and recombination proteins [BR:
aqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J5J86_14340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Zn_ribbon_PriA
ResIII
Helicase_C
DZR
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QTL01979
LinkDB
All DBs
Position
complement(3182573..3184747)
Genome browser
AA seq
724 aa
AA seq
DB search
MSARTVDVLLPLGLDVPYSYAVPDGLDLKPGDLVHVPLGSRGMIGCVWPRKGESQGVASA
KLKAVKAKLAYEPLPPDLIRLIDWMADYTLAPRGMVLRMALRHGESPGEARERVGVRPTG
KDPIRRSAAREKLLAVLADGFVRGKSEAAREAGVSPSVVDGLVDEGVLESLVLPPEPAAY
PPDPDHAAPTLSPEQAGVAQILTAAVDARAFAPHLLDGVTGSGKTEVYFEAVAEAVRQGR
QCLILLPEIALTQAFLDRFTRRFGVKPAEWHSGVSTRRRARLLSAVARGEAQVVAGARSA
LFLPFKDLALIIVDEEHDPAYKQDDGVAYHARDMAVVRARLAGAPIVLTSATPSIETEVN
ARRGRYRRLPLPERFGGAKVPGLAPIDLRREGPPRGRWIAPRLESEINQTLEDGGQALLF
LNRRGYAPLTLCRSCGHRMRCPSCSAWLVEHRFRRRLTCHHCGYQAPVPDTCPSCQAKDS
LIPCGPGVERLQEEVAALFPDARSLVLSSDLTGGIERMRAELDAVANGEVDVIVGTQLVA
KGHNFPGLALVGVVDADVGLGHGDPRAAERTFQLVHQVAGRAGRGAAEGRGFIQTHMPEH
PVMQALVKGDRAAFYENEIAAREEAQLPPFGRLASLIISASEAQAAEAHARALLASAPRD
RDVRVLGPAEAPLAILRGRHRWRLLARSPRGYDLSAYLRAWRAAAPKPTGNVKVTIDVDP
MTFL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgcaccgtcgatgtcctgctcccgctcggcctcgacgttccctattcctat
gccgtccccgacgggctcgacctgaagcccggcgatctcgtccatgtgccgctgggatca
cgcggcatgatcggctgcgtctggccacgcaagggtgagagccagggtgtggcctcggcc
aagctgaaggcggtgaaggccaagctcgcctatgagccgctgccgcccgacctcatccgc
ctcattgactggatggcggactatacccttgccccccgcggcatggtgctgcgcatggcg
ctgcgccatggggagagcccgggcgaagcgcgcgagcgcgtgggcgtgcggcccaccggt
aaggaccccatccgccgctcggcggcgcgggagaagctgctggcggtgctggctgatggc
ttcgtgcgcggcaagagcgaggcggcgcgggaggcgggcgtctcgccctctgtggtggac
gggctcgtggacgagggcgtgctggaatccctcgttttgccgcccgagcccgccgcctat
ccccccgatcccgatcatgccgcccccaccctctcgcccgagcaggcgggtgtggctcag
atcctgacggcggccgtggacgcgcgcgccttcgcgccccatctcctggacggcgtcacc
ggctccggcaagacggaggtctatttcgaggcggtggcggaagcggtgcggcaaggtcgg
caatgcctcatcctgctgccggaaatcgccctcacccaggcctttctcgaccgcttcacc
cgccgcttcggcgtgaagccggcggaatggcattcgggcgtctccacccgccgccgcgcg
cgcctgctctcggcggtggcgcgcggcgaggcgcaggtggtggcgggcgcgcgctcggct
ttgttcctgcccttcaaggacctcgccctcatcatcgtcgatgaggagcacgaccccgcc
tacaagcaggatgacggcgtcgcctaccatgcccgcgacatggcggtggtgcgggcgcgg
ctcgccggggcgcccatcgtgctgacctccgcgaccccctccatcgagaccgaggtgaat
gcacggcgcgggcgctatcgccgcctgcctctgccggagcgcttcggcggcgccaaggtg
ccgggccttgcgccgattgatctcaggcgcgaaggcccgccgcgcggccgctggatcgcc
ccgcgcctggaaagcgagatcaaccagaccctggaggatggcgggcaggcactgctgttc
ctcaaccggcgcggctatgccccgctcaccttgtgccgcagctgcgggcatcgcatgcgc
tgcccctcctgctcggcctggctggtggagcaccgcttccgccgccgcctcacctgccat
cattgcggctatcaagccccggtgccggacacttgccccagctgccaggccaaggacagc
ctcatcccctgcggccccggcgtggagcgactgcaagaggaggtggcggcactgttcccg
gacgcgcgctctctggtgctctcctccgacctcaccggcggcatcgagcgcatgcgggcg
gagctggatgcggtggccaatggcgaggtggatgtgatcgtcggcacccaattggtggcc
aaggggcacaatttccccggccttgccctggtgggggtggtggatgcggatgtgggcctc
ggccatggcgacccccgcgcggccgagcgcaccttccaactggtgcatcaggtggcgggg
cgggcggggcgcggcgcggcggagggacgcggcttcatccagacccatatgcccgagcat
ccggtcatgcaggcgctggtgaagggcgaccgcgcggccttctatgaaaacgagatcgcg
gcgcgggaagaggcccagttgccccccttcggacggctcgccagcctcattatctcggcg
agcgaggcccaggcggcggaagcccatgcccgggcgctgctggccagtgccccgcgcgac
cgggacgtgcgcgtcctggggcccgcagaagcgcccctggcgatcctgcgcgggcgccac
cgctggcggctgctggcccgctcgccgcgcggctatgacctctcggcctatcttcgcgcc
tggcgggcggcggcgcccaagcccaccggcaatgtgaaggtgaccatcgacgtggacccg
atgaccttcttgtaa
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