Aquabacter sp. L1I39: J5J86_15100
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Entry
J5J86_15100 CDS
T10434
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aqi Aquabacter sp. L1I39
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqi03032
]
J5J86_15100
03400 DNA repair and recombination proteins [BR:
aqi03400
]
J5J86_15100
Enzymes [BR:
aqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J5J86_15100
DNA replication proteins [BR:
aqi03032
]
Prokaryotic type
DNA Topoisomerases
J5J86_15100
DNA repair and recombination proteins [BR:
aqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J5J86_15100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
QTL02125
UniProt:
A0A975DMA9
LinkDB
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Position
complement(3335407..3336570)
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AA seq
387 aa
AA seq
DB search
MPLHPASLSARPERPALPSTVTPSSPAQRKPPVANPTPSKPTSRKARARTTAQLARAAGL
VMVRRDTLNITRRRCGRGYRYFDGTGKPITDKDLISRLAALAVPPAYADVRFASHPRAHL
QAVGRDAAGRVQYRYHPDWEAVRGQLKAERLARFAEALPRIRRRVARDLSAPVGSRLLAL
AGVVELVTLTAIRPGEEAYARERGTRGAATLLKSNLRHKPQGLELSFQAKGGRKVVCAIA
DPRFLSLVAALRQLPGRRLFQYRNAQDEVRPVRAGDVNAYLKQVSGIPVSLKDFRTLVAS
ARVLEELAVREPAASDRRRNAQILEAVRIAAETLHNTPAICRKSYVLPAVVEAFEDGTLS
RFSQFLKRYRSPMRRATLLATLIREST
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgcaccctgcttccctttccgcccggcccgaacgccccgccctgccatccacc
gtcacacccagcagccccgcacagcggaagccgccggtggccaatccgacacccagcaag
ccgacgtcgcgcaaggcgcgggcgcgcaccacggcccagcttgcccgcgcggcgggcctc
gtcatggtgcggcgagacacgctgaacatcacccggcgccgctgcgggcggggctatcgc
tatttcgatggcacgggaaagcccatcaccgacaaggacctgatttcgcggctcgccgcc
cttgcggtgccgcccgcctatgcggatgtgcgcttcgcgtcccatccgcgcgcccatctc
caggcggtcgggcgcgatgcggcagggcgggtgcaatatcgctatcaccccgattgggaa
gcggtgcgcggccagttgaaggctgaacggctcgcccgtttcgccgaggccctgccccgc
atccgccgacgcgtcgcccgcgacctctcagccccggtggggtcccgtctgctggctctg
gcgggcgtggtggaactggtgaccctcaccgccatccggccgggcgaggaagcctatgcc
agggagcgcggcacgcgcggcgcagcgacgctgctgaaatccaacctgcggcacaagccg
cagggcctggagctgagcttccaggccaagggcggccggaaggtggtctgcgccatcgca
gatccccgcttcctgtccctggtggcggccttgcgccaattgccggggcggcgtctgttc
cagtatcgcaacgcccaagacgaggtgcggccggtgcgggcgggggatgtgaatgcctat
ctcaagcaggtgtccggcatcccggtctcgctcaaggatttccgcaccctggtcgcttcc
gcaagggtgctggaggaattggccgtccgggagccggcagccagcgaccggcggcgcaat
gcgcaaatcctggaggcggtgcgcatcgccgccgaaaccctgcacaacacgccggccatc
tgccgcaagagctatgtcctgccggcggtggtggaggcgttcgaggacggcacgctgagc
cgcttttcgcaatttctgaagcgctaccgctcgcccatgcgccgcgcgacgctgctcgcc
acgctgatccgcgaaagcacctga
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