KEGG   Aquabacter sp. L1I39: J5J86_16240
Entry
J5J86_16240       CDS       T10434                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
aqi  Aquabacter sp. L1I39
Pathway
aqi03030  DNA replication
aqi03430  Mismatch repair
aqi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J5J86_16240
   03430 Mismatch repair
    J5J86_16240
   03440 Homologous recombination
    J5J86_16240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqi03032]
    J5J86_16240
   03400 DNA repair and recombination proteins [BR:aqi03400]
    J5J86_16240
Enzymes [BR:aqi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J5J86_16240
DNA replication proteins [BR:aqi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     J5J86_16240
DNA repair and recombination proteins [BR:aqi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     J5J86_16240
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QTL02338
LinkDB
Position
3592602..3593192
AA seq 196 aa
MRPPASLPPVVVALDVETTGVSGADRIVSIGMVRLETAGLADGNLVVEVHHAFCNPGRRS
HWAALKVHGIKDAFLAAQPPFADLADEICAFLSPASLLLAHNAPFDRRFLTQELALSGRL
GRLPPWLCTLQLSGAKLDVACADLGLTRAGAHHGALEDAWLALMVYLAHSGVSRDLLCAL
PTELTAATAAPLSALA
NT seq 591 nt   +upstreamnt  +downstreamnt
atgcgcccgccggcctctttgccgcccgtggtggtggccctcgacgtggagaccaccggc
gtcagcggggcggaccgcatcgtctccatcggcatggtccgcctggagacggcgggcctt
gcggacgggaacctggtcgtcgaggtgcaccacgcattctgcaatccaggtcggcgcagc
cactgggcggcgctgaaggtgcacgggattaaggatgcgttcctggccgcgcagccgccg
tttgccgacctcgccgacgagatctgcgcgttcctctctcccgccagcctcctcctcgcc
cacaatgcccccttcgaccggcgcttcctgacgcaggaactggctctttccggccgtctg
gggcgtctgccgccctggctttgcacccttcagctgtccggcgcgaagctggatgtggcc
tgcgccgatctcggcctgacgcgcgccggcgcacatcatggggcgttggaggatgcctgg
ctggcgctcatggtctatctcgcccattccggggtgtcgcgggacctcctgtgcgccctg
ccgacggagctgactgccgccaccgccgccccattgtccgccctggcgtag

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