Aquabacter sp. L1I39: J5J86_16475
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Entry
J5J86_16475 CDS
T10434
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aqi Aquabacter sp. L1I39
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
J5J86_16475 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqi03019
]
J5J86_16475 (rnc)
03009 Ribosome biogenesis [BR:
aqi03009
]
J5J86_16475 (rnc)
03036 Chromosome and associated proteins [BR:
aqi03036
]
J5J86_16475 (rnc)
Enzymes [BR:
aqi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
J5J86_16475 (rnc)
Messenger RNA biogenesis [BR:
aqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J5J86_16475 (rnc)
Ribosome biogenesis [BR:
aqi03009
]
Eukaryotic type
90S particles
RNase
J5J86_16475 (rnc)
Prokaryotic type
rRNA processing factors
J5J86_16475 (rnc)
Chromosome and associated proteins [BR:
aqi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
J5J86_16475 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QTL02381
LinkDB
All DBs
Position
3644977..3645687
Genome browser
AA seq
236 aa
AA seq
DB search
MTGSGGDIAAFETRIGHPFADRALIELALTHISAVKGSAPRVRSYQRLEFLGDHVLGSIV
SHMLYDAFPGAEEGELSRRLADLVREEACAEVADAMGVGSLIRVGTGEAQSGARKRRTIL
ADVAEAVVAAVYLDGGYPAAHALVERFWRSRLEAPKRPLRDPKTVLQEWAQGRGLPPPVY
REVGRSGPDHAPLFSISVELPGLDPAEAQGQSKQAAQKAAASAFLAREGVSAGDKT
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcagtggcggcgacatcgccgcattcgagacccgtatcggccatcccttcgcc
gaccgcgctctgatcgagctggcactgactcatatcagcgccgtgaaaggcagcgcgccc
cgcgtgcgctcgtatcagcggctggaattcctgggcgatcatgtgctgggaagcattgtc
tcccacatgctctatgacgcctttcccggtgccgaggaaggcgaactttcccgccgcctc
gccgacctggtgcgcgaagaggcctgcgccgaggtggcagatgccatgggtgtcggcagc
ctgatccgagtcggcacgggcgaggcccagtcgggggctcgcaagcggcggaccatcctg
gcggatgttgccgaggcggtggtggcagcggtctatttggatggcggctatccggctgcc
catgcactggtggagcgcttctggcgctcccggttggaggcgcccaagcggcccctgcgc
gatcccaagaccgtgctccaggaatgggcgcagggccggggtttgcccccgccggtttat
cgggaagtgggaaggtccggtccggatcatgcgccgctcttctccatcagcgtggaattg
ccggggcttgacccggcagaggctcagggacagtcgaagcaggcggcgcagaaggcggca
gcctccgctttccttgcaagggaaggcgtcagtgccggggacaagacatga
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