Aquabacter sp. L1I39: J5J86_17730
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Entry
J5J86_17730 CDS
T10434
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi00541
Biosynthesis of various nucleotide sugars
aqi01100
Metabolic pathways
aqi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J5J86_17730 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aqi01005
]
J5J86_17730 (rfaD)
Enzymes [BR:
aqi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
J5J86_17730 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
aqi01005
]
Core region
J5J86_17730 (rfaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Polysacc_synt_2
KR
adh_short_C2
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QTL02613
LinkDB
All DBs
Position
3919767..3920768
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AA seq
333 aa
AA seq
DB search
MSRPLVRDTVLVTGGAGFIGANIARAFASEGARVVVADWLEDGPKWRNIADILLDDVIRP
EATLDFLEREAGRVALVVHMGAISATTERDGDRIVARNIRPTLDLWELCARKGLRFIYAS
SAATYGNGAGGFTDDQSPTALAAQAPLNAYGWSKLMADRRFVADVEAGRPTPPQWAGLRF
FNVYGPREDHKGDMRSVINKIYPTAREGGAVTLFKSHVPQYEDGGQLRDFVYVGDCVDVV
RWLFETPSVSGIFNVGTGAARSFADLARAVFSAVGQPARIDYVDMPESIRNAYQYFTQAD
MTKLRAAGYDRPFTALEEGVRRYVTEYLRGRNA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgctcgtccgcgacaccgtcctcgtcaccggcggggcggggttcatcggc
gccaacatcgcccgtgcctttgcgtccgaaggggcgcgtgtggtggtggcggactggctg
gaggacggcccgaaatggcgcaacatcgccgacatcctgctggatgacgtgatccgcccc
gaggccacgctggactttctggagcgcgaggcgggccgggtggcgctggtggtccacatg
ggcgccatctctgccaccaccgagcgggacggggaccgcatcgtcgcccgcaacatccgc
cccacgctggatctgtgggagttgtgcgcgcgcaaggggctgcgcttcatctatgcctcc
tccgccgcgacttacgggaacggcgccggcgggttcaccgacgaccagagccccacggcg
ctcgccgcccaggcaccgctcaatgcctatggctggagcaagctgatggcggaccgccgc
ttcgtggcggacgtggaggccgggcgcccgacgccgccccaatgggcgggcctgcgcttc
ttcaatgtctatggtccgcgcgaggaccataagggcgacatgcgctcggtcatcaacaag
atctaccccaccgcccgggagggcggcgcggtgacgctcttcaagtcccatgtgccccaa
tatgaggatggcgggcagctgcgcgacttcgtctatgtgggcgattgcgtggacgtggtg
cgctggctgttcgagacgccctccgtctccggcatcttcaatgtgggcacgggcgcggcg
cgcagcttcgcggacctggcgcgggcggtgttctcggccgtggggcagccggcccgcatc
gattatgtggacatgccggagagcatccggaacgcctaccagtatttcacccaggcggac
atgaccaagctgcgtgccgccggctacgatcggcccttcacggcgctggaggagggggtc
cggcgctacgtcaccgaatatctgcgcggccgcaacgcctga
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