Aquabacter sp. L1I39: J5J86_20005 Help Entry J5J86_20005       CDS       T10434                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism aqi  Aquabacter sp. L1I39 Pathway aqi02020   Two-component system aqi02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:aqi00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     J5J86_20005 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     J5J86_20005 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aqi03021]     J5J86_20005 (rpoN) Transcription machinery [BR:aqi03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      J5J86_20005 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Arg_repressor Motif Other DBs NCBI-ProteinID:  QTL03024 LinkDB All DBs Position complement(4404893..4406410) Genome browser AA seq 505 aa AA seqDB search MALSPKMEFRQTQSLVMTPQLMQAIKLLQLSNMELVAYVEAELERNPLLERVPEGDGPDA AGEAAPAPATDEAPRTGDWMEAGEEPSRASMETRLDTDLGNLFPDDAPAERPGAGSAPSS SVDWGGGERGDDYNPEAFLASQTTLADHLEAQLAVAETDPARRLIGINLIGLIDETGYFT GDIEAVAAMLEASVSDVEDVLRLIQTFEPSGVGARTLSECLAIQLREKDRCDPAMQALLD HLDLLARHDRNALKRLCGVDNEDLADMIAEIRRLDPKPGLVFGGGVVHPLVPDVFVRPAS DGSWLVELNSETLPRVLVNQTYHANVARAARSPKEKSFLADCLQSASWLTRSLDQRARTI LKVSSEIVRQQEAFLDHGVRHLRPLNLRTVADAIGMHESTVSRVTSNKYISTPRGVMELK FFFSSAIAASGGGEAHSAEAVRHRIKSLIDQESPDDILSDDTLVQKLKDDGIDIARRTVA KYRESMNIASSVQRRREKQAQRSPA NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atggccctctcgcccaagatggagtttcgccagacccagtcgctggtgatgacgccgcag ctgatgcaggccatcaagctgctgcagctctccaacatggagctggtggcctatgtggag gcggagctggagcgcaatccgctgctggagcgcgttcccgagggcgacgggccggacgcg gccggcgaggcggcacccgcgcccgccacggacgaggcgccgcgcaccggcgactggatg gaagcgggcgaggagccgagccgcgcctccatggagacccgcctcgacaccgatctcggc aacctcttcccagacgatgcccccgccgagcgtcccggcgccggcagcgccccctcctca tcggtggattggggcggcggcgagcggggcgacgactataatcccgaagccttcctcgcg tcccagacgaccctggccgaccatctggaggcgcaactcgcggtggcggagaccgatccc gcccgccgcctcatcggcatcaatctgatcggcctcattgacgagaccggctatttcacg ggcgacatcgaggcggtggccgccatgctggaggcgagcgtttcggacgtggaggatgtg ctgcgcctcatccagaccttcgagccctccggcgttggcgcgcgcaccctgtccgaatgc cttgccatccagctgcgcgagaaggaccgctgcgatccggccatgcaggcgctgctggac catctcgacctcctcgcccgccatgaccgcaatgcgctgaagcgcctctgcggcgtggac aatgaggacctcgccgacatgatcgccgagatccggcgcctcgatccaaagcccggcctc gtctttggcggcggggtggtgcaccccttggtgccggatgttttcgtgcggcccgcttcc gacgggtcctggctggtggagctgaattcggagaccttgccccgcgttctggtgaaccag acctatcacgccaatgtggcgcgggcggcccgctcgcccaaggaaaagagcttcctggcc gactgcctccagagcgccagctggctgacacgctcgctcgaccagcgcgcccgcaccatc ctgaaagtctcgagcgagatcgtgcgtcagcaggaggccttcctcgatcatggcgtgcgg cacctgcgccccttgaacctgcgcaccgtggccgatgccatcggcatgcacgaatccacc gtctcgcgggtcacctccaacaaatacatctccaccccccgcggcgtgatggagctgaaa ttcttcttctcctccgccatcgccgcctccggcgggggcgaggcccattcggcggaggcg gtgcgccatcgcatcaagagcctgatcgaccaggagagccccgacgacatcctctccgac gacacgctggtgcagaagctgaaggacgacggcatcgacatcgcccgccggacggtggcg aaatatcgcgagagcatgaacatcgcctcctcggtccagcggcggcgggaaaagcaggcg cagcgcagccccgcctga

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