Aquabacter sp. L1I39: J5J86_23365
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Entry
J5J86_23365 CDS
T10434
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi03030
DNA replication
aqi03430
Mismatch repair
aqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5J86_23365 (dnaE)
03430 Mismatch repair
J5J86_23365 (dnaE)
03440 Homologous recombination
J5J86_23365 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqi03032
]
J5J86_23365 (dnaE)
03400 DNA repair and recombination proteins [BR:
aqi03400
]
J5J86_23365 (dnaE)
Enzymes [BR:
aqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5J86_23365 (dnaE)
DNA replication proteins [BR:
aqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5J86_23365 (dnaE)
DNA repair and recombination proteins [BR:
aqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5J86_23365 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HROB
Motif
Other DBs
NCBI-ProteinID:
QTL03625
LinkDB
All DBs
Position
complement(5182676..5186116)
Genome browser
AA seq
1146 aa
AA seq
DB search
MSDPGFVHLHLHSAYSLLEGALTFGKLADLAKGDSQPALALTDTGNLFGALEFSEKMSGV
GIQPILGVSLAVDVETPQQRGSVLPVKKPRIVLLAARAEGWRNLMTLVSRSYLETANDDE
PRIRLDWLDDANAGLIALTGGPSGPIDRALATGHADIAAERLATLARLFPDRLYVEVQRH
GMAVEQFVEPQLLDLAYDRSLPLVATNEPFFAAQSDYEAHDALVCIAEGRMVSEGDRPRL
TAEHRFKTRAEMLALFADLPEATANTVEIARRCAHRVRTAKPILPRFTTGEGQGEDALAA
EAAELERQAQEGLAQRLAKHGPAEGLDTQVYEERLAYEISVITKMKFPGYFLIVSDFIKW
AKAHDIPVGPGRGSGAGSLVAYSLQITDLDPLRFGLLFERFLNPDRVSMPDFDVDFCQDR
RDEVIQYVQRRYGRSQVAQIITFGTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPAAP
VTLKQAIHDEPRLQAAREEEVVGRAFDIAVKLEGLNRHASTHAAGIVIGDRPLHQLVPLY
RDPKSDMPVTQYNMKWVEQAGLVKFDFLGLKTLTTITTAVRLIRQRGIDLDISKIPLDDP
KTYAMLARGETVGVFQVESAGMRRALVDMKADRIEDLIALVALYRPGPMANIPVYCDCKH
GRAQPDYIHPKLEPYLKETFGVIIYQEQVMQIAQALAGYSLGEADLLRRAMGKKIRAEME
KQRARFVDGAQERGVPKAQADTIFDLLAKFADYGFNKSHAAAYALVAYQTAWLKANYATE
FLAASMTLDMGNTDKLAEFRQESQRLGIEVVPPSVNLSAREFQVVDGKIIYAMAAIKGVG
GAAVDALVAARGGQPFKDLSDFADRLPVKMVNKRTLESLVNAGCFDVLEKNRARVFASLE
VIVAHAAREEQGRALGQNDMFGSGPVKAALPLPQAEPWEPSERLKREHDAIGFFLTGHPL
DDYAPALKKMRVQSFADFSRAVRNGAAAGRLGATVVSRQERRTKSGTRMGIVGLSDPSGH
FEAVIFSEGLAHYRDLLEPGTPLLLMVGAELQGEDVRVRIQTCERLDEVTSRANRSLRIF
VKSPEPLDGIARRLSDGKGDGEVSLVLLMEESKAEVEIRLEGRFPVSPQIAGALKSIPGV
IAVEAA
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcccggcttcgtccacctgcatctgcattcggcctattccctgctggaaggc
gcgctgacgttcggcaagctggcggacctcgccaagggcgattcccagccggcactggcg
ctcaccgacacgggcaatctgttcggggcgctggagttttccgagaagatgtcaggcgtc
ggcatccagcccatcctgggcgtgtcgctggcggtggatgtggagacgccgcagcagcgc
gggtccgtcctgccggtgaagaagccgcgcatcgtgctgcttgcggcgcgggcggagggg
tggcggaacctcatgaccttggtctcccgttcctatctggagacggccaatgacgatgaa
ccgcgcatccggctggattggctggacgacgccaatgcgggcctgatcgcgctcacgggc
ggtccgtcggggccgatcgaccgggccctggccacgggccacgcggacattgcggcggag
cgcctcgccacgctggcgcgcctcttcccggatcggctttatgtggaagtgcagcgccat
ggcatggccgtggaacagttcgtggagccgcagctcctggaccttgcctatgaccgctcg
ctgcccctcgtcgccaccaacgagcccttcttcgctgcccaatcggactatgaggcgcac
gatgccctggtctgcatcgccgagggccgcatggtgtcggaaggcgatcgcccgcgcctg
acagccgagcaccgcttcaagacccgggccgagatgctcgccttattcgcggacctgccg
gaggcgacggccaatacggtggagatcgcccgccgctgcgcccaccgggtgcgcaccgcc
aagcccatcttgccgcgcttcaccaccggggaagggcagggggaggacgcgctggccgcc
gaggcggccgagctggagcggcaggcgcaagagggcctcgcccagcgcctcgccaagcat
ggccccgccgaagggctggacacgcaggtctatgaggagcggctcgcctacgagatttcc
gtcatcaccaagatgaagtttcccggctacttcctcatcgtgtcggacttcatcaaatgg
gccaaggcccacgacattccggtgggaccgggccgtggatcgggcgcgggatcgctggtg
gcctattcgctccagatcacggacctcgacccgctgcggttcggcctgctgttcgagcgc
ttcttgaaccccgaccgcgtgtccatgcccgacttcgacgtggacttctgccaggaccgg
cgcgacgaggtgatccaatatgtgcagcgccgctacgggcgctcacaggtggcgcagatc
atcaccttcggtaccctccaggcgcgtggcgtgctgcgcgacgtggggcgcgtgctggag
atgccctatggccaggtggacaagctctgcaagctggttccgcagaacccggctgcccct
gtcaccctcaagcaggccatccatgacgagccccgcctccaggcggcgcgcgaggaggag
gtggtcggccgggccttcgacatcgccgtgaagctggagggcctcaaccgccacgcctcc
acccacgcggcgggcatcgtgatcggcgaccggccgctgcaccagctggtgccgctctat
cgcgatcccaagtccgacatgccggtcacccagtacaatatgaaatgggtggagcaggcg
ggcctggtgaagttcgacttcctcggtctcaagacgctgaccaccatcaccacggcggtg
cggctgatccgccagcgggggatcgacctcgacatttccaagatccccctggacgatccc
aagacctacgccatgctggcccgcggcgagacggtgggcgtgttccaggtggaaagcgcg
ggcatgcgccgcgccctcgtggacatgaaggccgaccgcatcgaggacctgatcgccctc
gtggccctctaccgtcccggccccatggccaacatccccgtctattgcgactgcaagcac
gggcgggcgcagccggactatatccaccccaagctcgagccctatctgaaggaaaccttc
ggcgtcatcatctaccaggagcaggtgatgcagatcgcccaggcgctcgccggctattcg
ctgggcgaagccgacctgctgcggcgcgccatgggcaagaagatccgcgccgagatggaa
aagcagcgcgcccgcttcgtggacggcgcccaggagcgcggcgttcccaaggcccaggcg
gacaccatcttcgacctcctggccaagttcgccgactacggcttcaacaagtcccacgcg
gcggcttacgcgctggtggcctaccagaccgcttggctgaaggcgaactacgccaccgag
ttcctggcggcgtccatgacgctggacatgggcaatacggacaagctggcggaattccgc
caggagtcccagcggctcggcatcgaagtggtgccgccttcggtgaatttgtcggcccgt
gaattccaggtggtggacggcaagattatctatgccatggccgccatcaagggcgtgggt
ggtgcggccgtggatgcgctggtcgccgcccgcggcggtcagccgttcaaggacctgtcg
gatttcgccgatcgcctgccggtcaagatggtcaacaagcgcacccttgaaagcctggtg
aatgccggctgcttcgacgtgcttgagaagaaccgcgcccgggtcttcgcgtcgctggaa
gtgatcgtcgcccatgccgcgcgcgaggagcagggcagggcgctggggcagaacgatatg
ttcggctccggcccggtgaaggccgccctgccgctgccccaggccgagccgtgggagcct
tccgagcggctgaagcgcgagcatgatgccatcggcttcttcctcactggccatccgctg
gatgattacgcccccgctctgaagaagatgcgggtgcagtccttcgcggatttttcccgt
gccgtgcgcaatggcgcggcggccgggcggctgggggccaccgtggtgtcacgccaggag
cggcgcaccaagtccgggacccgcatgggcattgtcggcctgtccgacccctccggccat
ttcgaggcggtgatcttctccgagggcctcgcccattatcgcgacctcttggagccgggc
acgccgctcctgctcatggtgggggcggagcttcagggcgaagatgtgcgggtgcgcatc
cagacctgcgagcggctggacgaggtgacctcgcgcgccaatcgcagcctgcgcatcttt
gtgaagtcgcctgaacccctcgacggcatcgcccggcgcctgtcggacggcaagggagac
ggggaggtcagcctcgtcctgctcatggaggagagcaaggcggaggtggagattcgcctg
gagggacggttccccgtctcgccccagatcgcgggcgcactgaagtccattccaggcgtg
attgcggtggaggcggcctga
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