Aquabacter sp. L1I39: J5J86_23545
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Entry
J5J86_23545 CDS
T10434
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J5J86_23545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqi03021
]
J5J86_23545
03400 DNA repair and recombination proteins [BR:
aqi03400
]
J5J86_23545
Enzymes [BR:
aqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J5J86_23545
Transcription machinery [BR:
aqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J5J86_23545
DNA repair and recombination proteins [BR:
aqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J5J86_23545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
QTL03661
LinkDB
All DBs
Position
complement(5226569..5226958)
Genome browser
AA seq
129 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLAGHRARMISSGAPITIDRDNDKNPVVALREIADETVSP
EDLKEDLIHSLQKYTEVDEPEPEAVPMIASSESGSVDDADIVMDRMTEEELLAGLQGLVP
PEHSDDDEG
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgttaccgttgaggattgcatcgacaaggtggacaaccggttcgagctggtc
ctcctcgccggccaccgtgcccgcatgatttcttccggcgccccgatcaccatcgatcgc
gacaacgacaagaaccccgtcgtggccctgcgtgagattgctgacgagaccgtcagcccc
gaggatctcaaggaagacctgatccactcgctccagaagtacaccgaggtggacgagccc
gagcctgaggcggtgcccatgatcgcctccagcgagtccggctccgttgatgatgcggac
atcgtgatggaccgcatgaccgaggaagagctgctcgccggcctccagggcctcgtgccc
ccggagcattcggacgacgacgaaggctga
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