Aquabacterium sp. J223: LRS07_06245
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Entry
LRS07_06245 CDS
T11732
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
aqj Aquabacterium sp. J223
Pathway
aqj00541
Biosynthesis of various nucleotide sugars
aqj01100
Metabolic pathways
aqj01110
Biosynthesis of secondary metabolites
aqj01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
aqj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LRS07_06245 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LRS07_06245 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LRS07_06245 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LRS07_06245 (rfbB)
00525 Acarbose and validamycin biosynthesis
LRS07_06245 (rfbB)
Enzymes [BR:
aqj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LRS07_06245 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Cellsynth_D
KR
Pfc11_Clp1_ID
Motif
Other DBs
NCBI-ProteinID:
UUX96871
LinkDB
All DBs
Position
complement(1292329..1293399)
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AA seq
356 aa
AA seq
DB search
MTILVTGGAGFIGSNFVLDWVEQVGEPVVNLDALTYAGNRANLAALAGDARHTFVHGDIC
DRALVDRLLAEHRPRAIVHFAAESHVDRSISGPAEFMRTNVTGTFTLLEGARAHWGGLQG
AEREAFRFHHVSTDEVYGSLAPDAPAFTEDHPYEPNSPYSASKAASDHLVRAWHHTYGLP
VVTTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPIYGDGQNVRDWLYVRDHCSGIRAVLA
GGRLGETYNIGGWNEKTNLEIVHTVCDLLDELKPDAAGSYRRLITYVKDRPGHDRRYAID
ARKVERELGWRPAETFDTGIRKTVRWYLDHTDWVQQVQSGAYRDWVSQQYGAERRA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacgattctcgtgaccggcggcgccggcttcatcggcagcaacttcgtgctcgactgg
gtcgagcaggtcggcgagccggtggtcaacctcgacgccctgacctacgccggcaaccgc
gccaacctggccgcgctggcgggcgacgcgcgccacaccttcgtgcacggcgacatctgc
gaccgcgcgctggtcgaccgcctgctggccgagcaccggccgcgcgccatcgtgcacttc
gccgccgagagccacgtcgaccgcagcatcagcggcccggcggagttcatgcgcaccaac
gtcaccggcaccttcacgctgctggaaggcgcgcgcgcccactggggcggcctgcagggc
gcggagcgcgaggccttccgcttccaccacgtcagcaccgacgaggtctacggcagcctg
gcgcccgacgcgccggccttcaccgaagaccatccgtacgagccgaacagcccctactcg
gccagcaaggcggcgagcgaccacctggtgcgcgcctggcaccacacctacgggctgccg
gtggtcaccaccaactgctcgaacaactacgggccgtttcacttccccgagaagctgatc
ccgctgatgatcgtcaacgccctggcgggcaagccgctgccgatctacggcgacggccag
aacgtgcgcgactggctgtacgtgcgcgaccactgcagcggcatccgcgcggtgctggcc
ggcggccggctgggcgagacctacaacatcggcggctggaacgagaagaccaacctcgag
atcgtgcacaccgtgtgcgacctgctcgacgagttgaagcccgatgccgccggctcctac
cgtcggctcatcacctacgtcaaggaccggcccggccacgaccgtcgctacgccatcgac
gcccgcaaggtcgagcgtgaactgggctggcgcccggccgagaccttcgacaccggcatc
cgcaagaccgtgcgctggtacctcgaccacaccgactgggtgcagcaggtgcagagcggt
gcctaccgcgactgggtcagccagcagtacggcgcggagcgccgcgcatga
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