Aquabacterium sp. J223: LRS07_19840
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Entry
LRS07_19840 CDS
T11732
Name
(GenBank) Ig-like domain-containing protein
Organism
aqj Aquabacterium sp. J223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SdrD_B
Cadherin_4
Big_9
Peptidase_S8
Cadherin_5
CarboxypepD_reg
SpaA
DUF7619
NOMO1-like_2nd
Cohesin
Motif
Other DBs
NCBI-ProteinID:
UUX97936
LinkDB
All DBs
Position
complement(4226202..4231688)
Genome browser
AA seq
1828 aa
AA seq
DB search
MIRFENAADATAPAQVVTVTQVLDEDLDPRTFRVDDFGFADFRSEQPANASFFQTRIDRT
EEQGIFIDVSARIDTTTRTITWVFTSIDPETGEVPVDATKGFLQPNDETGRGDGFISYTI
KARRTVETGTVIDAEARIVFDTQGPIDTPPIFNTLDAGKPSSAVQALPATSESTQFTVSW
SGTDDEGGSSIRDYDVYVKTNDGAWTLWLFNTTDTEGVFEGEGGNSYAFYSVARDNAGNV
EAAPAVADASTLVLGQTGSISGIVFNDIDADGTRDADEAGLAGWTVFLDGDADGVLDNTE
SSTVTDALGNWRFDGLQPGSYPVTLVKQADFDVTAPATGVHSVTLVGGDTADDRAFGVLP
LGSISGTQFEDTDGDGVFDAGEQGVAGWTMFLDDDGDGQLDAGERSTVTAADGTYTFTGL
RAGSYRVAQVIPEGWIQTLPGTASANTSVVTLSGSLASISLPACACGGTITTVAAQQAGW
DEQLTELDSLRADPVFADLDGRGVRVVVIDTGIDRSHEFFDGRIVYQYDFADNDADATDV
NGHGTHVAGVIGGEDALFGGVAPGVELIVLKVFGDDGSGSFRHLERALQWVVANADAYNI
GVVNLSLGDGGNWGDAVSRYGLGDEFAALQAQSIISVAAAGNNYAQVNALGVAYPAADPA
VLAVGAVWSGDFGGPWRFGNGGVDEATGADHIASFSQRDDELLDAFAPGARLTSAAIGGG
VRSMQGTSQSAAYVSGVAALAQQAAREHLGRSLTVEEFRTLLVSTATWIHDGDDERDNVV
NSELDFPRLDAKGLIQALMALAPANGGGTGGDGGGGTGDDGEPPALPSTDGGAIDVVLAV
DEDRGDVNFGAFELASLGGTVFDDLDGDGVQDAGEAGIVGATVFVDLDGDGVLDAGEAGT
TTGAGGAWSLTNLGPGTLTVAETLPAGWARTTVASHAVAITSGLVATGLDFGRRDIAPVA
VDDTANVVEGQTVTGNVLDNDSDPGRVDNALLSVSLIEGPAMGSLILNADGSFSYTAAKP
FTGVVSFRYLVSDGVSTDEGRADITVLPDGSFVPGTVSGKVFDDLDGDGVQDAGEAGIAG
ATVFLDADTDGVLDAGETSTTTSTGGAWSFGGLAAGTVTVADVLPAGWQRTTVASHAVVI
TSGVVATGLDFGRRDIAPVAVDDGASVVEGQTVTGNVLDNDSDPGRADNGLLSVSLLEGP
ATGSLTLNADGSFSYTAAKPFTGVVSFRYLVSDGVSTDEGQADITVLPDDSFVPGTVSGA
VFDDLDGDGVQDAGEAGIAGATVFLDADTDGVLDAGETSTTTGAGGTWTFGGLAAGTVTV
ADVLPAGWQRTTVASHAVVITSGVVATGLDFGRRDIAPVAVDDGASVVEGQTVTGNVLDN
DSDPGRADKALLTVSLIEGPATGSLTLNADGSFSYTAAAGFVGNASFRYAVSDGVSSDEG
LVQITVLHDMLRVQQFSGRHDGFEVVFSRPFASAGLDVGGLSGDVVVTNEGGQVVPGSLF
LAADGLSARFLATGAGLADGVYQVKLVSGAQAWRDLTGSTLDGNADGTPGDHWLGSFTVA
KGGAVTVGLADVARGPGQALGLAPADTGLQLRLSNGSGVTAVSFVLAYDPALLGVATLQR
GSGLPAGATFSATELTAGRISVQIASATALAAGSVNLAMLVATVPAGAAYGAAQVLDVQN
LQVNAGAIAALDNDATHVAAFPGDLNGDRAHTNADLVLMDALLAGSLSRLDAYPRIDAAL
LGDANGSGSFDGIDSLRFGQALAGTGSAIVRLPGSPPPPPPVVTPPAPPVVKVPPVVKPI
TPPSSSWVTPLVSLSATVSANTSIRVTV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttcgagaacgcggcggacgcgacggcaccggcccaggtggtcaccgtgacc
caggtgctcgacgaggacctggacccgcgcaccttccgcgtcgacgacttcggcttcgcc
gacttccgcagcgagcagccggccaacgcctccttcttccagacccgcatcgaccgcacc
gaggagcagggcatcttcatcgacgtgtcggcccgcatcgacacgacgacgcgcaccatc
acctgggtcttcacctccatcgacccggagaccggcgaggtgccggtggacgccaccaag
ggcttcctgcagcccaacgacgagaccggccgcggcgacggtttcatctcctacaccatc
aaggccaggcgcacggtggagacgggcaccgtcatcgacgccgaggcgcgcatcgtcttc
gacacccagggcccgatcgacaccccgccgatcttcaacaccctggacgccggcaagccc
agcagcgccgtgcaggcgctgcccgcgaccagcgagagcacccagttcaccgtgagctgg
tcgggcaccgacgacgagggcggctcgtcgatccgcgactacgacgtctacgtcaagacc
aacgacggcgcctggacgctgtggctgttcaacaccaccgacaccgaaggcgtgttcgag
ggcgagggcggcaacagctacgccttctacagcgtggcgcgcgacaacgccggcaacgtc
gaggccgcgcccgcggtggccgacgccagcaccctggtgctggggcagacgggcagcatc
tcgggcatcgtcttcaacgacatcgacgccgacggcacgcgcgatgccgacgaagccggc
ctggcgggctggacggtgttcctcgacggcgacgccgacggcgtgctcgacaacaccgag
agcagcaccgtcaccgacgcgctgggcaactggcgcttcgacggcctgcagccgggcagc
tacccggtcacgctggtgaaacaggccgacttcgacgtcacggcgccggccaccggcgtg
cacagcgtgacgctggtcggcggcgacaccgccgacgaccgagccttcggcgtgctgccg
ctgggcagcatctccggcacgcagttcgaggacaccgacggcgacggtgtgttcgacgcc
ggcgaacagggcgtggccggctggaccatgttcctcgacgatgacggcgacggccagctc
gacgccggcgaacgcagcaccgtcaccgcggccgacggcacctacaccttcaccggcctg
cgtgccggcagctaccgggtggcgcaggtcatccccgaggggtggatccagacgctgccg
ggcaccgcgtcggccaacaccagcgtggtcacgctgtccggctcgctggcgtccatcagc
ctgccggcctgcgcctgcggcggcaccatcaccacggtggcggcgcagcaggccggctgg
gacgagcagctcaccgagctggacagcctgcgcgccgacccggtgttcgccgacctcgac
ggccgcggcgtgcgcgtggtcgtcatcgacaccggcatcgaccgcagccacgagttcttc
gacggccgcatcgtctaccagtacgacttcgccgacaacgacgccgatgcgaccgacgtc
aacggccacggcacccacgtcgccggcgtcatcggcggcgaggacgcgctgttcggcggc
gtggccccgggggtcgagctgatcgtgctgaaggtcttcggcgacgacggcagcggctcc
ttccgccacctcgagcgcgcgctgcagtgggtggtggccaatgccgacgcctacaacatc
ggcgtggtcaacctgtcgctgggcgacggcggcaactggggcgatgcggtgtcgcgctac
ggcctcggcgacgagttcgccgcgctgcaggcgcagagcatcatctcggtggcggcggcg
ggcaacaactacgcgcaggtcaacgcgctcggcgtggcctacccggccgccgacccggcg
gtgctggcggtgggcgcggtgtggagcggcgacttcggcggcccctggcgcttcggcaac
ggcggcgtggacgaggccaccggcgccgaccacattgcgagcttcagccagcgcgacgac
gaactgctcgacgccttcgcccccggcgcccgcctcacgtcggccgccatcggcggcggc
gtgcgcagcatgcagggcaccagccagtcggcggcctacgtgtccggcgtggcggcgctg
gcccagcaagcggcgcgcgagcacctcggccgcagcctgacggtggaggagttccgcacg
ctgctggtgtccaccgccacctggatccacgacggcgacgacgagcgcgacaacgtggtc
aacagcgaactggacttcccgcggctggatgccaagggcctgatccaggcgctgatggcg
ctggccccggccaacggcggcggcaccggcggcgatggcggcggcggcaccggcgacgac
ggcgagccgccggcgctgcccagcaccgacggcggcgccatcgacgtggtgctggccgtg
gacgaggaccgcggcgacgtcaacttcggcgccttcgagctggccagcctcggcggcacg
gtgttcgacgacctggacggcgacggcgtgcaggacgccggcgaggccggcatcgtcggc
gccaccgtcttcgtcgacctggacggcgacggcgtgctcgacgccggcgaagccggcacg
accaccggcgccggcggcgcctggtcgctgaccaacctcgggccgggcaccctgacggtg
gcggagaccctgcccgccggctgggcgcgcacgacggtggcctcgcatgcggtggccatc
accagcggcctggtcgcgaccggcctcgacttcggccgccgcgacatcgccccggtggcg
gtggacgacaccgccaacgtggtcgagggccagacggtcaccggcaacgtgctggacaac
gacagcgacccgggccgggtggacaacgcgctgctcagcgtgtcgctgatcgaaggcccg
gccatgggcagcctcatcctcaacgccgacggcagcttcagctacacggcggccaagccg
ttcaccggcgtggtcagcttccgctacctggtcagcgacggtgtgagcaccgatgaaggc
cgtgccgacatcaccgtgctgcccgatggcagcttcgtgccgggcacggtcagcggcaag
gtgttcgacgacctcgacggcgacggcgtgcaggacgccggcgaggccggcatcgcgggg
gccaccgtgttcctcgacgccgacaccgacggcgtgctggacgcgggcgagaccagcacc
accaccagcaccggcggcgcctggagcttcggcggcctggcggccggcacggtcaccgtc
gccgacgtgctgccggccggctggcagcgcacgacggtggcctcgcacgcggtggtcatc
accagcggcgtcgtcgccaccggcctcgacttcggccgccgcgacattgccccggtggcg
gtggacgacggcgccagcgtggtggaaggccagacggtcaccggcaacgtgctggacaac
gacagcgacccgggccgtgccgacaacggcctgctgagcgtctcgctgctcgaaggcccg
gccaccggcagcctgacgctgaacgccgacggcagcttcagctacacggcggccaagccg
ttcaccggcgtggtcagcttccgctacctggtcagcgacggcgtcagcaccgacgaaggc
caggccgacatcaccgtgctgccggacgacagcttcgtccccggcacggtgagcggcgcg
gtgttcgacgacctcgacggcgacggcgtgcaggacgccggcgaggccggcatcgccggg
gccaccgtgttcctcgacgccgacacggacggcgtgctcgacgcgggcgagaccagcacc
accaccggtgccggcggcacgtggaccttcggcggcctggccgccggcacggtcaccgtg
gccgacgtgctgccggccggctggcagcgcacgacggtggcctcgcacgcggtcgtcatc
accagcggcgtcgtcgccaccggcctcgacttcggccgccgcgacatcgccccggtggcg
gtggacgacggcgccagcgtggtcgagggccagacggtcaccggcaacgtgctggacaac
gacagcgaccccggccgcgccgacaaggcgctgctcaccgtgtcgctgatcgaaggcccg
gcgaccggcagcctgaccctcaacgccgatggcagctttagctacaccgcggccgccggc
ttcgtcggcaacgccagcttccgctacgcggtgagcgacggcgtgagcagcgacgaaggg
ctggtccagatcacggtgctgcacgacatgctgcgcgtgcagcagttcagcggccgccac
gacggcttcgaggtggtgttctcgcggcccttcgccagcgccggcctcgacgtcggcggc
ctgagcggcgacgtggtggtgaccaacgaaggcggccaggtcgtgcccggttcgctgttc
ctggcggccgatggcctgagcgcacgcttcctggccaccggggccggcctggccgacggc
gtctaccaggtcaagctggtgtccggcgcgcaggcctggcgcgacctcaccggcagcacg
ctggacggcaacgccgacggcacgccgggcgaccactggctgggcagcttcaccgtcgcc
aagggcggcgcggtcaccgtcggcctggccgacgtggcgcgcggcccgggccaggccctc
ggcctggcgccggccgacaccggcctgcagctgcgcctgagcaacggcagcggcgtcacc
gcggtcagcttcgtgctggcctacgacccggcgctgctgggcgtggccaccctgcagcgc
ggcagcggcctgccggccggcgccaccttcagcgcgacggagctgacggccggccgcatc
tcggtgcagatcgccagcgccaccgcgctggcggccggcagcgtcaacctggcgatgctg
gtggccaccgtgccggccggtgcggcctacggtgcggcgcaggtgctggacgtgcagaac
ctgcaggtcaacgcgggggccatcgccgcgctggacaacgacgccacgcacgtggcggcg
ttccccggcgacctgaacggcgaccgcgcgcacaccaacgccgacctggtgctgatggac
gcgctgctggccggcagcctgtcgcggctggacgcctacccgcgcatcgacgccgccctg
ctgggcgacgccaacggcagcggcagcttcgacggcatcgactcgctgcgcttcggccag
gcgctggccggcaccggctccgccatcgtgcggctgccgggcagcccgccgccgccgccg
ccggtggtcacgccgccggcaccgccggtggtcaaggtgccgccggtggtcaagccgatc
acgccgccgtcgtcgtcctgggtcacgccgctggtgtcgctgtcggccaccgtcagcgcc
aacaccagcatccgcgtgaccgtctga
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