Aquiluna sp. KACHI24: AKACHI_01870
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Entry
AKACHI_01870 CDS
T08897
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aqk
Aquiluna sp. KACHI24
Pathway
aqk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aqk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AKACHI_01870 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqk03021
]
AKACHI_01870 (rpoA)
03400 DNA repair and recombination proteins [BR:
aqk03400
]
AKACHI_01870 (rpoA)
Enzymes [BR:
aqk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AKACHI_01870 (rpoA)
Transcription machinery [BR:
aqk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AKACHI_01870 (rpoA)
DNA repair and recombination proteins [BR:
aqk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AKACHI_01870 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDP99850
LinkDB
All DBs
Position
185219..186208
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLHEEVLGTNRSRFVLDPLEPGFGYTLGNSLRRTLLSSIPGAAVTNIRIQGVS
HEFSTIPGVKEDVVEVILNIKNLVVSSEHDAPVVAHLSKNTAGPVTAADIQVPAGVEVHN
PELVIGTLNAKGKLEIEFIIERGRGYVQASQNRNPDAEAGVIPVDSIYSPVLKVSYRVEA
TRAGEFTNFDKLIVDVETKPSIAPRDAVASAGSTLVELFGLAKELNSEAEGIEIGPAPVE
VAASNELSTPIEDLDLTVRSYNCLKREGINTVSELIALSEDQLMNIRNFGSKSVDEVREK
LAGLGLRFKDAVPGFDGAYFGGGFDDDQI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgctaattgcacagcgcccaactctgcacgaagaagtacttggtacaaaccgttcacgt
tttgtacttgacccactagagccaggctttggctacacccttggaaactccctccgccgc
acccttctaagctccatcccgggtgccgctgttaccaacatccgtatccagggtgtctct
cacgagttctcgactatcccaggtgtcaaggaagacgttgttgaggtaatcctgaacatc
aagaacctggtcgtctcctctgagcacgacgctcctgttgttgcacacctctccaagaac
accgccggtcctgtgaccgcagctgacatccaggtgccagccggtgttgaggttcacaac
ccagagctagttatcggaaccctgaacgccaagggcaagctagagatcgagttcatcatt
gagcgcggtcgcggttatgttcaggcttctcagaaccgcaacccagatgcagaggctggc
gttatcccagttgactccatctactccccagttctaaaggtctcctaccgcgttgaggca
actcgtgccggtgagttcaccaacttcgacaagctaatcgtcgacgttgagaccaagcca
tcgattgctcctcgcgatgcagttgcatccgcaggttcaaccctggttgagctgttcggt
ctggccaaggagctaaacagcgaggctgagggtatcgagatcggtccagcaccagtagag
gtagctgcatcgaacgagctctcaaccccgattgaggaccttgacctaaccgttcgttcc
tacaactgcctaaagcgtgagggaatcaacaccgtttctgagctgatcgcactgagcgag
gaccagctgatgaacatccgtaacttcggttccaagtctgttgacgaggtccgcgagaag
cttgcaggtctaggccttcgcttcaaggacgcagttccaggcttcgatggcgcctacttc
ggtggcggattcgacgacgaccagatctaa
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