Aquiluna sp. KACHI24: AKACHI_03600
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Entry
AKACHI_03600 CDS
T08897
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aqk
Aquiluna sp. KACHI24
Pathway
aqk03420
Nucleotide excision repair
aqk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKACHI_03600
03430 Mismatch repair
AKACHI_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqk03400
]
AKACHI_03600
Enzymes [BR:
aqk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKACHI_03600
DNA repair and recombination proteins [BR:
aqk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKACHI_03600
MMR (mismatch excision repair)
Other MMR factors
AKACHI_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
AAA_30
AAA_lid_7
Motif
Other DBs
NCBI-ProteinID:
BDQ00024
LinkDB
All DBs
Position
355820..358846
Genome browser
AA seq
1008 aa
AA seq
DB search
MAKYSAQQVYSVLGDHTLTPEQVRAVAGASTQDPTLVIAGAGSGKTELMSVRILYLVANQ
LALPEEILGLTFTKKAASELSARVLKALYRLRESDMWPQDLEQDFLPPKIATYNSFGNEV
FRQFALDVGLEPDAQVLGASSAVGLARELLRRLNLDDHPELGDWDKTAGYLTEKLLSMVQ
EITDNQASSQAVRQELAAFEKHVAALPKSEGGSMERFAYTQGFLSDAAVNQLLAGLAERF
IELKKERNLVDYADQVSLALEATTRSEIELPYKFVMLDEYQDTSAIQVRFLAELFRGKPV
MAVGDPNQAIYGFRGASAANLSSFFEDFGSGETLSLSTCWRSTEQIVEVANFTASSLTSP
GLDQIKLRAIKSGNGVSAVFHQDLFAEAQAAASYFAENLKDQSGALLTRTKSQMGIFVAA
LEQHGVPVEVSGLSGLIEIPEVVDLIALLKVLSSAEASVELIRLLTSAKWRIGLRDIAKL
GELAKRLTRIRPEADFASEVTLIEALDSLRFEGAHKQSEISESGLSRMRQAALLLHKLRS
TPSLSITELAWLGVRELEIDIELYAKSKAANPLRHLEQFIERLSEYEAATVRPSLSGLMQ
WLEYALERDSFELPKSGSKKGVVQVMSVHASKGLEWDLVWVAQLVQGAFPIDGKDSKGWL
AAGKIPYSLRADSKVLPEFDYQTAKSQKQLNEQFSDFKDAVKARALLEERRLAYVAFTRA
AKELTLSGSYYKPGAQNPKPPSPFLLELKEAGLVEFELTEPLESNPLDAVAEVASWPAFD
SNAELLQLADLVSSNPDTAPSHELALLFEERERNRTTPEPWLPSRISVSNLVRFLENPEA
FLAELSRPMPPMYSDHAQRGTDFHSAIESILLDQDVALFDADVTSLVDGFKNSRFATLQP
KFVEQSIEFVLAGHVVVCKLDAVFFDGHLYEIVDWKSGSKPSGEDLESRKVQLALYRIAL
SQWLGVPPERIRASFYYAADDVELAPDNLPSRMELEARIADLRKARQG
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtattccgcccagcaggtctattcagttcttggagatcacaccctgactcct
gagcaggtgagagccgtagcgggagcatcaactcaagacccaaccttagtgatcgcgggt
gcgggaagcggaaagactgaactgatgtcagttcggatcctctacctggttgctaaccaa
cttgctttgccagaggagattctcggactgacctttaccaagaaggcagcgagcgagctc
tctgcgagagtgctgaaggcgctatatcgacttcgcgagagtgatatgtggccgcaggac
ttggaacaagatttcttgccaccaaagatcgccacctataactctttcggcaacgaggtg
tttagacagttcgctttagatgttggccttgaaccggatgctcaggtgcttggggcatca
agtgccgtcgggttggccagggagctgttgaggcgactcaatcttgatgatcatcctgaa
ctaggggactgggacaagaccgctggttatctcaccgagaagcttttgtcgatggtccag
gagattactgataatcaggcttcctcgcaggctgtgaggcaggagctcgccgcctttgaa
aaacacgtcgcagcgttaccaaagagcgagggcgggtcgatggaacgctttgcttacacc
cagggattcctatccgatgctgccgtaaatcagcttcttgctgggttggcggagcgattt
atagagctgaagaaagaacgaaatctcgtggactacgcggatcaagtttcattggcgctc
gaggctacaactaggtcagagatcgagctgccatacaagttcgtgatgttggatgagtat
caagacacctcagcaattcaagttcgattcctagcggagctattcaggggtaagccagtg
atggcggtgggtgacccgaatcaagcaatttacggattccgaggagcaagcgccgcaaac
ctcagcagcttttttgaggactttggttctggggagactctgtcactaagcacctgctgg
cgatcaaccgagcaaatcgttgaggtggcaaatttcactgcttcatccctaaccagcccc
ggcctcgatcaaattaaacttcgtgccatcaagtctgggaacggcgtttcggcagtattt
catcaggaccttttcgcggaggcccaggccgccgctagctactttgctgaaaatttgaag
gaccaatcaggagcactgctaaccagaaccaaatcacaaatgggaatcttcgtagctgct
ttagagcagcacggcgtgccagttgaggtgagtggactctcgggcttgattgaaatcccc
gaggtggttgatctgatcgcgcttctcaaggtgctctcgagcgctgaggcatcggttgag
ctcatccggcttttgacatccgcgaagtggcgaatcggtctgagagacattgcaaagctc
ggtgagctagctaagcgacttaccagaattaggccagaagcagattttgcaagtgaagtc
accctgattgaagcgctggactcacttcgttttgagggagctcacaagcaaagcgaaatc
agcgagtcgggactttccagaatgcggcaggccgcattgctgctgcacaagttgcgcagc
acaccatccctctcgattactgaattggcttggctaggggttcgggagcttgaaatagac
atcgagctctacgccaaatctaaggcggccaacccactcaggcaccttgagcagttcata
gaacgcctgagtgaatatgaggctgcgactgtgcgccccagcctgagtggtttgatgcag
tggctcgaatacgcccttgagcgcgacagttttgaacttccaaagagtggttcaaaaaag
ggagtagttcaagtcatgtcggttcacgcctccaagggtctggagtgggatctggtctgg
gtggcccaattggtccagggggcatttcctattgatggcaaggactccaagggctggctt
gcagcagggaaaatcccctactcgctgagggctgactccaaagtgctccctgagttcgac
tatcaaacggctaagtctcaaaagcagttgaatgagcagttctccgatttcaaggatgcc
gtcaaggctagagctttgctggaggagcgccgcttagcttatgtggcgttcactagggct
gccaaagagctgacccttagtggctcctactacaaacccggtgcccaaaaccccaaaccg
ccatcgccgtttttgctggaactcaaagaagctggcctggttgaatttgagctaaccgag
ccattggagagtaaccctctggatgctgtcgcagaagttgcgagctggccggcatttgac
tccaatgcagagttattgcagttggctgatttagtttcgtccaatcccgatacggcgcct
tctcatgagctcgccctgctctttgaagagcgcgagcgaaatcggaccactccagagcct
tggcttccaagcagaatctcggtttctaacctggttcgcttcttggagaatccagaagca
tttttagcggagctgtcccgcccgatgccgccgatgtattccgatcatgcgcagcgggga
actgattttcactcagcgattgaatcgattctgttagaccaggatgtagcactatttgat
gctgacgtaacgtctttggtagacgggttcaagaattctcgattcgcaaccttgcagcct
aaatttgttgaacagtcgattgagttcgtcctggctggccatgtggtggtctgcaagttg
gatgccgtcttctttgatggccatctctatgaaattgtcgactggaagtctgggtcaaag
ccaagcggcgaggacctggagtccagaaaagttcagctagcgctctaccggatcgcattg
tcacagtggctcggagttccacctgagcgcatcagggcaagtttctattacgcagcagat
gatgtggagttagctccagacaacctaccctcgcgcatggagctagaggcgcgaatagct
gaccttagaaaagctcgtcagggttag
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