Aquiluna sp. KACHI24: AKACHI_03620
Help
Entry
AKACHI_03620 CDS
T08897
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aqk
Aquiluna sp. KACHI24
Pathway
aqk03420
Nucleotide excision repair
aqk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKACHI_03620
03430 Mismatch repair
AKACHI_03620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqk03400
]
AKACHI_03620
Enzymes [BR:
aqk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKACHI_03620
DNA repair and recombination proteins [BR:
aqk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKACHI_03620
MMR (mismatch excision repair)
Other MMR factors
AKACHI_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BDQ00026
LinkDB
All DBs
Position
359982..361652
Genome browser
AA seq
556 aa
AA seq
DB search
MIRLDISGPTTSERHAPLGKSMDDSARHPLLDSLDEDQREVAQQLRGPVAVIAGPGSGKT
RVISHRIAYGVAMGVYDPAKVLAVTYTNKAAAELRTRMRALGVPNVSVRTFHAAALSQLQ
FFWPQLTGAQSPRLVPSKLALLRESAESLRIRLDQDQLFSLQSRLEYYRYTLTDPSGENF
VPAGSVQFEQFLALSDAYQALKRERKLIDWEDAVSLAAGMFRSEPQLLEQFRQQYRFFTV
DEYQDISALQQALLETWLDDREDVCVVGDPRQTIYSFAGANPDFLLRFSDRFPAADVFEL
NRNYRSSQEIVEYANRILGPDQIAQRALSSKPRFVEYPTALAEAQAISLRVSSLMREGVE
PGEIAVLVRSNHQIEAIEVELAEQGIPTQVRGAGRFFAKPEVVQAMHALRALTVTDLEKP
TFAAVSDVLRSLGWRTEGSGESWESLNWFITVLDELGGNPAIAEYVRELQERERSGHEPA
RNAVTLATIHSTKGLEWKCVFVASVSDSVFPPSRSAQEQFSEERRLYFVAITRAQELLEI
SFTSDRGRSPLLGSHS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ttgattaggttagacatttccggtccaacaacatcggaacgccacgcacccctagggaag
tcaatggatgattcagctcggcacccattgctagattccctcgatgaggaccagcgcgaa
gtggcccagcaacttcgcggtccagtcgctgtaattgccgggccggggtctggaaaaact
cgagttatcagccaccgaattgcctatggggtggcgatgggggtttacgatcccgccaaa
gtcctggcggtcacctatacaaacaaggcggcggcagagcttcgcaccagaatgcgcgcc
cttggagtcccaaatgtttcggtgcgaacctttcacgccgctgcgcttagccagctgcag
tttttctggcctcaactcaccggagcgcaatcacctcggttggtgccatcaaaacttgct
cttctgcgcgagtcggcagagtcgctgagaattcgactggatcaagatcaactgttcagc
cttcagtctcggttggagtactaccgctacacgctgacggatccatcaggtgaaaacttt
gtccccgccggatcggttcagtttgaacagtttcttgccctgagtgatgcgtatcaggca
ctcaagcgcgagcgaaagctgatcgactgggaggatgcggtttctctggcagcgggcatg
tttagatcggaaccgcagctgctcgagcagtttcgacagcagtatcggttctttacggtt
gatgagtaccaggacatttctgctttgcaacaggcgctgttggaaacttggctggatgat
cgagaagatgtctgtgtagttggtgatccgcgtcaaaccatctatagcttcgctggcgca
aaccctgatttcctgttgcgattctccgatcggtttccggctgcggatgtgtttgagcta
aatcgcaattaccggtcatctcaggagattgtggagtacgcaaaccgaatcttgggaccg
gatcaaattgcgcagcgtgcgctgagctccaagccgcggtttgtggaatatccaactgcg
ctggctgaggcgcaagcgatatcacttcgagtgagttctctaatgagagagggtgttgag
cctggtgagatcgctgttttggtcaggtcaaatcaccaaattgaggcaatcgaggtcgaa
ctagcggagcagggaataccaactcaggtccgtggggctggaagattctttgcaaagcct
gaggtggttcaggcgatgcatgcccttcgagcgctcactgttacagacctggagaaaccc
acctttgccgcggtgtctgatgtgttgcgctcactgggctggagaaccgaaggttcagga
gagagctgggagagtctcaactggtttatcaccgtgctagatgaactcggcggcaatccc
gcaatcgccgaatacgttcgtgaacttcaagagcgcgagcgctccggccacgaaccagcg
agaaatgctgtgacattggccaccattcactcaactaaaggtttggagtggaagtgcgtc
ttcgtggcctcggttagcgattcggtttttccgccatcgcggtcagcccaagagcaattc
tcggaggagcgcaggctttacttcgtggccatcaccagagctcaggaactgctggaaatc
tcattcacctcggatcgaggtcgctccccactactcggcagccacagttag
DBGET
integrated database retrieval system
