Aquiluna sp. KACHI24: AKACHI_03850
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Entry
AKACHI_03850 CDS
T08897
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
aqk
Aquiluna sp. KACHI24
Pathway
aqk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKACHI_03850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqk03021
]
AKACHI_03850
03019 Messenger RNA biogenesis [BR:
aqk03019
]
AKACHI_03850
Transcription machinery [BR:
aqk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AKACHI_03850
Messenger RNA biogenesis [BR:
aqk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AKACHI_03850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Spore_III_AA
AAA_25
NACHT
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
BDQ00049
LinkDB
All DBs
Position
387496..389109
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AA seq
537 aa
AA seq
DB search
MDEIQQEKPARRVRRATSATVEASAPQTGAPQEAKTTRRRSTKKESGAEVSTETKAESKP
EATERPAREERAPREERAPREGRQDRGGRDRQRNEGSEERSEGESNQGERGERESRQDRD
DDRRGGRNRRGRFRDRDRRRNGSQDEAEPEVSEDDVLVPVAGILDVLDNYAFLRTSGYLP
GPNDVYVSLGQVKKYGLRKGDAVVGSIRQPRESDNNQRQKFNALVRVDSVNGQTLEEAAA
RVEFGKLTPLYPDARLRLETDPKKLSTRIIDLVAPIGKGQRGLIVSPPKAGKTLVLQAIA
NAISTNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELAIERAKR
LVEMGHDVVVLLDSITRLGRAYNLSAPASGRILSGGVDSSALYPPKKFFGAARNIENGGS
LTILATALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDINASGTRREEMLM
SPQETKIIWKLRRALAGLEQQQALELVLSRLKDTQSNVEFLLKLEKSMPVPSETDAE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatccagcaggaaaagccagcaagacgcgttcgccgcgctaccagcgcaacc
gtcgaggcttccgcaccacagactggagcaccacaagaggccaagaccactcgccgccgc
tccactaagaaggaatcgggcgcagaggtaagcaccgagaccaaggccgagtcaaagcca
gaagcaaccgagcgtccagcacgcgaagagcgcgcacctcgcgaggagcgtgcaccacgt
gagggccgtcaggaccgcggtggtcgtgaccgccagcgcaacgagggctccgaggagcgc
agcgagggcgagagcaaccagggcgagcgcggcgagcgcgagtctcgtcaggatcgtgac
gatgaccgtcgcggtggcagaaaccgtcgcggtcgcttccgtgaccgtgaccgccgtcgc
aatggatcacaggatgaggcagagccagaggtatctgaggatgatgtcctagttccagtc
gctggaatcctggatgtccttgacaactacgctttccttagaacctcgggatacctaccg
ggtccaaacgatgtttacgtgtctctcggacaggtcaagaagtacggccttcgcaagggt
gatgcagtcgtcggttcaatccgtcagcctcgtgagagcgacaacaaccagcgccagaag
ttcaacgcgctagtacgagttgactcggtaaacggtcagaccttggaagaggcagccgct
cgcgtcgaatttggcaagctgaccccgctttacccagacgccagactgcgtcttgagacc
gaccctaagaagttgtccaccagaatcattgacctggtagccccgattggtaagggacag
cgtggattgatcgtttccccaccaaaggccggtaagaccttggtgctacaggcaattgca
aacgcaatttcaaccaacaacccagaggttcacctgatggttgttttggttgacgagcgc
cctgaagaagtcaccgacatgcagcgcactgtcaagggtgaggtcattgcctccaccttc
gaccgccctgccgatgaccacaccaccgttgctgagctcgcgattgagcgcgccaagcgt
ttggttgagatgggtcacgacgttgtcgtgctgctcgactcgatcactcgtctaggtcgt
gcctacaacctttccgctccagcatccggccgcattctctccggtggtgttgactcttca
gccctctacccaccaaagaagttcttcggtgcagccagaaacatcgaaaacggtggctcg
ctgactatcttggcaactgccttggttgagaccggatccaagatggatgaggtcatcttc
gaggagttcaagggaactggaaacatggagcttcgcctatctcgtcagctcgctgacaag
cgaatcttcccagccgtcgacatcaatgcctctggaaccagacgcgaagaaatgctgatg
agcccgcaggagaccaagatcatctggaagctgcgccgcgctcttgcaggcttggagcag
cagcaggcacttgagctggttctgagccgcttgaaagacactcagagcaacgttgagttc
ttgctaaagcttgagaagtcaatgccggttccttccgagactgatgcggagtaa
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