Aquiluna sp. KACHI24: AKACHI_05280
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Entry
AKACHI_05280 CDS
T08897
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aqk
Aquiluna sp. KACHI24
Pathway
aqk03030
DNA replication
aqk03430
Mismatch repair
aqk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKACHI_05280 (dnaE)
03430 Mismatch repair
AKACHI_05280 (dnaE)
03440 Homologous recombination
AKACHI_05280 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqk03032
]
AKACHI_05280 (dnaE)
03400 DNA repair and recombination proteins [BR:
aqk03400
]
AKACHI_05280 (dnaE)
Enzymes [BR:
aqk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKACHI_05280 (dnaE)
DNA replication proteins [BR:
aqk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKACHI_05280 (dnaE)
DNA repair and recombination proteins [BR:
aqk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKACHI_05280 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
BDQ00192
LinkDB
All DBs
Position
528884..532372
Genome browser
AA seq
1162 aa
AA seq
DB search
MSESFVHLHNHTEYSMLDGAARVKKLIAKAVELGMPAIAMTDHGNTHGAYEFWKQAKAQG
IKPIIGIEAYVAPGSRLEKSKVRWADGGDDDVSGGGAYSHMTMWSTDNASMQNLFRLSSE
AYLSGYYFKPRMDRELLNKYGKGLIATTGCPGGEVQTRLRLGQYDEAIRTAAEFRDIFGE
GNFFVEVMDHGLSIEKRVRDDLLRLAKDLSLPLVATNDLHYTNQEDHEAHDALLCVQVGS
NIYDQNRFKFESQEYYLKSAAQMRELFKDLPEAANNTLLIAERSEVNFEKRDLMPRFPVP
EGETEADWLAKEVWRGMDRRFPNGYSDKHREQAAYELDVIVRMGFPGYFLVVADFISWAR
SQGIRVGPGRGSAAGSIVAYALGITELDPLEHDLIFERFLNPERLSMPDIDVDFDDRRRP
EVIRYVTEKYGDDRVAQIVTFGTIKAKQALKDAARVLAMPYAVGEKLTKAMPPMVLGRDV
SLNELIDPAAERYSEAAEFREIIENDEESKRVFDLAQGLESLKRQWGVHAAGVIMSAEPL
MDVIPIMKREEDGAIITQFDQPPCEDLGLLKMDFLGLRNLTVLDDALENIRQNRGESVVL
EELDLNADEKTFELLSRGDTLGVFQLDGDAMRQLLRQLKPTEFEHISAVIALYRPGPMGM
NSHINYAQRKNGQQQSEPVHPELEEPLREILGPTYGLIVYQEQVMAAAQKVAGYSLGQAD
LLRRAMGKKKPEELEKQYEIFSAGMQERNYSKDAIKALWETLLPFADYAFNKAHSAGYGV
LSYWTAYLKANYPAEYMAALLTSVGDSKDKLAIYLNECRKMGIKVLPPDVSESIGVFAAV
GDDIRFGLGAIRNVGKNVVDAIVEARQAGKFTSFHDFLSRVGQQATSKRVVESLIKAGAF
DSLGHTRRSLIAIHEEAIDSAVVLKKQQASGQMDLFGDLLEEDPAVIEVPTLPEWTKRDL
LSHEREMLGLYVSDHPLAGMEALLMRHSDMGVIALRETQLKDGETVTIAGLITQVAHRVA
RTSGNPYGQVTLEDFSGEISVMFMGKTYLENRELLIADQTVAIRGRISRRDEEVTLQAFS
IEVLDAGREQGGVLRLAIKESMANKTILGKLGEILDTHPGPVEVQVKLIGSAVKHFLLPQ
RVAVGHDLFGELKALLGPDAVD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagtcttttgttcacctgcacaatcacaccgagtattcgatgctcgatggggca
gcgcgggtcaaaaagctgattgcgaaggcagtcgagcttggcatgcctgccatagcgatg
accgaccatggcaatactcacggagcgtatgaattctggaaacaggcgaaggctcagggc
ataaagccgattattggtatcgaagcctacgtggctcctgggtctcgcctcgaaaaatcc
aaggttcgatgggccgatgggggagatgacgacgtctccggtggtggtgcctatagccac
atgaccatgtggtcaaccgataacgcctcgatgcaaaatctcttccggctatcctccgag
gcatatctttcgggttactacttcaagccgcgcatggaccgcgagcttctcaataaatac
ggcaagggtttgatcgcgaccacgggttgccccggtggagaggtgcaaacccgactgcgc
ctgggtcagtacgacgaggccattcgaactgcagcggagttcagggacatcttcggtgag
ggcaattttttcgtcgaggttatggatcacggcctctcaatcgagaagcgtgttcgtgac
gacctactgcgtttggcaaaggacttgagcctccctctggttgcaactaatgatttgcac
tacacaaatcaggaggaccacgaggcccacgacgcgctgctgtgtgtccaggttggttca
aatatctatgaccaaaaccgcttcaagttcgaatctcaggagtactacctaaagtctgct
gcgcaaatgcgggagctcttcaaggacctacccgaggctgccaacaacactttgttgatt
gcagagcgctccgaagtgaattttgaaaagcgggacctcatgccaaggttcccggttccg
gagggggagactgaggctgattggttggccaaagaggtttggcgcggaatggatcgtcga
ttcccaaacggttactccgacaagcaccgcgagcaggccgcctatgaactcgatgtcata
gttcgaatgggcttcccaggttacttcctggtagtggccgacttcatctcctgggcccga
tcccaaggcattcgcgtaggtcccggacgaggatcggctgcaggttcaatcgtcgcttac
gcccttggtatcacggaacttgatccgctggagcacgatctgatcttcgagcgttttttg
aacccagagcgactctcaatgcctgatatcgatgtcgacttcgacgatcgtcgcagaccg
gaagtcatccgttacgtcacggagaagtacggcgatgaccgagtggctcagatcgtcacc
ttcggaaccatcaaggccaaacaggcattgaaggatgctgctcgggttttggccatgcca
tatgccgttggggagaagctcacgaaggcgatgcctccgatggtgctcggacgcgatgtg
tcgcttaatgaattgatcgatcccgctgccgaacgctactctgaggcggctgaattcagg
gagatcatcgagaatgatgaggagtcaaagcgagtctttgatctcgctcaaggccttgaa
tctctgaagcgccaatggggagttcacgctgcaggtgtgatcatgtcggcagagccactg
atggatgttatccccatcatgaagcgcgaagaagacggcgcgattatcacgcagttcgat
caacccccttgtgaagatctaggtcttctaaagatggacttcttgggtcttagaaaccta
actgtcttggatgacgctctagagaacatccggcaaaaccgtggcgagagtgttgtgttg
gaggagctcgacctcaacgccgacgaaaagaccttcgagctactctctcgtggtgacaca
ctgggtgtttttcagctcgatggtgacgccatgcgacagctacttcgtcagctaaaacca
acggaattcgagcacatatcagcagtaattgcgctttatcgcccgggtcccatgggcatg
aactctcacatcaactatgcccagcgtaagaatgggcagcagcagtccgagccagtgcat
ccagaactcgaagaaccgcttcgcgagatcttgggccccacctatggactgattgtctac
caagagcaggttatggcggccgctcaaaaagtggccggatactcgctgggtcaagcagac
ctgctgcgtcgagccatgggaaagaaaaagcctgaggagctggaaaagcagtacgaaatt
ttcagtgctggtatgcaagagcgcaactactccaaagacgcgatcaaggccctctgggag
actttgcttccatttgccgactacgcgttcaataaggctcactcagcgggttacggcgtg
cttagttactggaccgcttatctcaaagccaattacccagccgagtacatggcggcgttg
cttacaagcgttggtgattcgaaggacaagcttgcgatctacctcaatgaatgtcgcaag
atgggtatcaaggtgctaccgccggacgtcagtgaatcaattggtgtttttgctgcggta
ggtgatgacattcgatttggtctaggtgcaatccgaaacgttggcaaaaacgtagtcgat
gcgattgtcgaggctcgtcaagctggaaagttcacctctttccacgacttcctatcgcga
gtcggtcagcaggccacctcgaagcgcgttgtcgaatctctcattaaggctggagccttt
gactcacttggacacacccgcaggtctctgattgcaattcacgaagaggcaattgactca
gcagtggttttgaagaagcagcaggcatctggccagatggatctcttcggcgatctttta
gaagaggatccagccgtgattgaggtgcctactcttccagagtggaccaaacgtgacctg
ctatcgcatgagcgcgagatgctgggtctttacgtctcggatcaccctctggctggcatg
gaagcccttctgatgcggcactcggatatgggcgtcattgcgcttcgtgagacccagctc
aaagacggagagacggtcaccattgcgggtttgattactcaggttgcccaccgcgtcgcc
agaacctctgggaacccctacggtcaagtgacgctggaggatttctctggcgaaatttca
gtgatgttcatgggtaagacctacctagaaaaccgcgagctcttgattgccgaccaaaca
gtcgccattcgcgggcgaatttcaagacgcgatgaagaggtgacacttcaggcattctcg
attgaagttttggatgccggtcgtgagcaaggtggcgtcctcaggcttgcaatcaaggag
tccatggcaaacaagaccatcctgggtaaattgggtgaaattctggatacccacccagga
ccagtggaggttcaagtcaaactgatcgggtcagccgtcaagcatttcttgcttcctcaa
cgagtagcggtaggacacgatttgttcggagagctcaaggccctgctaggccctgatgca
gtcgattag
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