Aquiluna sp. KACHI24: AKACHI_10840
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Entry
AKACHI_10840 CDS
T08897
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aqk
Aquiluna sp. KACHI24
Brite
KEGG Orthology (KO) [BR:
aqk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqk03032
]
AKACHI_10840 (topA)
03400 DNA repair and recombination proteins [BR:
aqk03400
]
AKACHI_10840 (topA)
Enzymes [BR:
aqk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AKACHI_10840 (topA)
DNA replication proteins [BR:
aqk03032
]
Prokaryotic type
DNA Topoisomerases
AKACHI_10840 (topA)
DNA repair and recombination proteins [BR:
aqk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AKACHI_10840 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BDQ00748
LinkDB
All DBs
Position
complement(1100576..1103149)
Genome browser
AA seq
857 aa
AA seq
DB search
MAKKLVIVESPAKAKTIAKYLGSDFEVLASVGHIRDLAEPKELPAEKKKGSLAKFSIDVE
NDFSPYYVISPGKSKTVSELKSAMKSAEELYLATDEDREGEAIAWHLLEVLKPKIPVKRM
VFNEITKEAIAQAAQNTRALNEDLVAAQETRRVVDRLVGYEISPVLWRKINRGLSAGRVQ
SPAMRMLVERERERMAFVAASYGSVTVQLSKDGTKFEAKLLEQNSKRVATGKSFDANGKL
TQDAVVLSPEVATKISQGLEGANLTVLSVEAKPSTRKPYAPFTTSTLQQEASRKLGMSAK
QAMDTAQQLYQDGHITYMRTDSPSLSVQATLAARAAATKLFGADLVPDAPRLYGAKSKNA
QEAHEAIRPSGESFRHPDELRSVLSGKSLALYELIWRRTVASQMSDAKLSTTSVRLGTKL
GSDELVFNASGTVVTYKGFLAVYDETREEESDDEAKLPNLSHKDVLVVESSESKLHSTQP
PARYTEASLVKALEEQGIGRPSTYAAIISTILSKGYAVKQGSALVPEWISFTVTRFLEEN
FGDLVNYEFTAKMEEDLDRIALGELDRTGWLKDFYLGDHGLKQTVESLGESDPRAINSFE
ISPGVLLRTGKYGPYIELEEAGERRIVNIPEGLAPDALTPEKAAELIAAPPASDRILGVD
PESGLEIAVKDGRYGPFVTLVDEGNPKPKTASLFKDMSVATVTLEDALKLLSLPREVGVD
PESGQVITAQNGKYGPYLKRGVDSRSLTSESEIFSITLDQAIEIYKQPKYGARRTASTPL
REFGEDPASGKAVVAKTGQFGNYVTDGIINATVPKDEPLDELSSDRAFELLAIRREKLGV
EPGETPKTQKKTTRKKR
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaaactagtgattgttgagtcgcccgccaaagcgaagacaatcgccaagtac
ctcggctctgacttcgaggtactcgcatccgtcggccacattcgtgatcttgctgaaccc
aaggaacttccagcggagaagaaaaaaggctcgctggccaagttttcgattgatgttgag
aatgacttctctccttactatgtaatctccccagggaaatccaagacagtctccgagttg
aaatcggccatgaagtcggccgaggagctctatctcgccaccgatgaagaccgcgagggt
gaagccatcgcctggcacctgcttgaagtcctgaagccaaagattccagtaaagcgaatg
gtgttcaacgagatcaccaaagaggcaatcgctcaagctgcccagaacacccgtgcgctg
aacgaagatctagtcgcggcccaggaaactcgtcgcgtggtggatcgcctagttggatac
gaaatttccccagtgctgtggagaaagataaaccgtggtctttccgctggtcgcgttcag
tcgcctgcaatgagaatgcttgttgagcgtgaacgtgaacgcatggcgttcgtggctgca
agctatggatctgtaaccgttcagttgagcaaagatggcaccaagtttgaagccaagcta
ctggagcaaaattcaaagcgggtggcaacaggtaagagctttgatgcaaatggaaagctc
actcaagatgctgtagttctgagccctgaggtcgcaaccaaaatttctcagggtcttgag
ggtgcaaacctaactgtgctctcggtcgaggcgaagccttcaaccagaaagccctatgca
ccttttactacgtcgactttgcagcaggaggcatcccgcaagcttggtatgagtgccaag
caggccatggatactgctcagcagctttaccaagacggtcacatcacctacatgcgaacc
gactcaccgtcgctttcggtgcaggccactctggcggcgagagctgccgccaccaagctc
tttggtgctgatttagttccagatgctccacgtctatatggagcgaagtcgaagaatgct
caagaggcacacgaggcaattcgtccatccggagagagctttaggcacccagatgaactt
cgttcagttctatccggaaaatcgctagctctctatgaactgatttggcgcagaaccgtt
gcatcacagatgtctgatgccaagctttcgaccacctcggttcgacttggaaccaagctt
ggttcggacgagttggtattcaacgccagcggaaccgttgtcacctacaaaggattcttg
gcggtctatgacgaaactcgtgaggaagaatctgatgacgaggccaaacttccgaacctt
tcccacaaggatgttttagtcgttgagagcagtgagtccaaacttcactccacccaacca
cctgctcgctataccgaggcctccctggtgaaggcccttgaggagcaggggattggaaga
ccatcaacctatgccgcaattatctccacgatcttgtccaagggatatgccgtgaagcaa
ggcagtgccttggttcctgagtggatttcattcaccgtcaccagattcttggaggagaac
tttggtgatcttgtgaattacgagttcaccgccaagatggaagaggatctcgaccgtatc
gcacttggcgagctggatagaaccgggtggctcaaggacttctacctcggggaccacggc
ctaaagcagacggttgaatcgttgggggagtctgacccacgagcgatcaacagttttgaa
atctctccgggagttctgctgaggacgggtaagtacggcccctacatcgagcttgaagaa
gccggtgagcgcagaatcgtaaacattcccgagggtctggcacctgatgcactaactccc
gaaaaggctgctgagctaattgccgctccaccggcgtcagatcggattcttggcgtcgac
ccagagtcaggtttggagattgccgtcaaggatggccgctatggaccgtttgtgactctg
gtggacgagggcaatccaaagcctaagaccgcatcgcttttcaaggacatgtccgtagcg
acggtcactttggaagatgcgctcaagctcctctctctgccacgcgaggtcggtgttgat
ccagagagcggtcaggtaatcacggctcaaaatggtaaatacggaccatacctaaagcgc
ggtgttgactccaggtcactaaccagcgagagcgaaatctttagcatcactctcgatcaa
gccatcgagatctacaagcaaccgaagtacggcgctcgccgaacagcttcaactccgctc
cgcgaatttggtgaggatccagcatccggcaaggcagtggttgcaaagaccggccagttt
ggtaactacgtaactgacggcatcatcaatgcgactgttccaaaggacgagccgctggat
gaattatcgagcgaccgcgctttcgagttgctggccattcgtcgtgagaagcttggggtg
gagccgggtgaaacaccaaaaactcaaaagaagaccacccgcaaaaagcgctga
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