Aquaspirillum sp. LM1: BXU06_00760
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Entry
BXU06_00760 CDS
T04696
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aql
Aquaspirillum sp. LM1
Pathway
aql03420
Nucleotide excision repair
aql03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BXU06_00760
03430 Mismatch repair
BXU06_00760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aql03400
]
BXU06_00760
Enzymes [BR:
aql01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BXU06_00760
DNA repair and recombination proteins [BR:
aql03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BXU06_00760
MMR (mismatch excision repair)
Other MMR factors
BXU06_00760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
RskA_C
Motif
Other DBs
NCBI-ProteinID:
AQR63758
UniProt:
A0A1U9JI58
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All DBs
Position
184288..186447
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AA seq
719 aa
AA seq
DB search
MFSDHLAGLNPEQLRAVTLAQGSALVLAGAGSGKTRVLTTRIAWLIAGQRAMAANILAVT
FTNKAAREMHTRLSVMLPINPRGMWIGTFHGLSNRFLRTHWRDAGLPQTFAILDMQDQLA
AIKRLMKSLQVSDEKFPPRQVQAFINSHKDQGLRAEALKPHDAFNAKLTELYAAYDAQCR
REGVVDFAELLLRSYELLSNNEALREHYRARFSHILVDEFQDTNKLQYAWLTPFAGPHAS
VFAVGDDDQSIYAFRGAEVGNMRRLMADFQVAEPIKLEQNYRSCGNILDAANALIQHNDG
RLGKNLWTDAGAGEPVRLYRGWTDGNEAEFIVDEVRALRRDGHALANMAVLYRSNAQSRV
LEHALFQAGLPYRVYGGLRFFERQEIKHALAYLRLVASPEDDNALLRVINVPARGIGART
VENLQTASRERGVSLWQAACGQGGGRSAASLGKFVLLIEQLRQDALRLSFAQLVSHLIDF
SGLRAMYQSDKDGGEERLENLDELISAAVSFAPEDPAQIIAEFLAHASLEAGEHQAGAGE
DAFQLMTVHAAKGLEFDCVFVSGLEEGLFPHENALNDRHGIEEERRLMYVAITRARQRLY
LTQAQQRMLHGQTRYPLPSRFMDEIPPALTKNLSESMTAGLSSRHAPATTRAPAARSSGP
ARQELPGGWRIGQSVAHPKFGVGVILNAEALGEELRLYVNFAEHGAKWLDMRFAKLTPA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgatcatctggccggcttgaatccggaacagctgcgcgcggtcactctggcg
caggggtctgcgctggtgctggccggggctggcagcggcaaaacccgggtgctgaccacg
cggattgcctggctgattgccgggcagcgcgccatggcggccaatatcctggcggtgacc
ttcaccaacaaggcggcccgggaaatgcacacccgtttgtcggtcatgctgccgatcaat
ccgcgcggcatgtggattggcacctttcacggcttgtccaaccgctttttgcgcacccac
tggcgcgatgccggcctgccgcaaacctttgccatcctcgacatgcaggaccaactggcg
gcaatcaagcggctgatgaagtccctgcaggtgtcggacgagaaatttccgccgcgccag
gtgcaggcgttcatcaacagccataaagaccagggcctgcgcgccgaggcgctgaagccc
cacgatgccttcaacgccaagctgactgaactttacgccgcctacgacgcccaatgccgg
cgcgaaggcgtggtggattttgccgagctgctgttgcgcagctacgagctgctcagcaac
aacgaagccctgcgtgagcattatcgggcacggttttcgcatattctggtggacgagttc
caggacaccaacaagctgcaatatgcctggcttaccccgtttgccggcccgcacgccagt
gtgtttgccgtgggggacgacgaccagtcgatttatgccttccggggcgccgaagtgggc
aatatgcgccggctgatggccgattttcaggtggccgagccgatcaagctggagcagaac
taccgctcctgcggcaatattctggacgccgccaatgcgctgatccagcataacgatggc
cggctgggcaaaaacctgtggacggacgcgggtgccggcgagccggttcgcctgtatcgc
ggctggaccgacggcaacgaagccgaatttattgtggacgaagtgcgcgcgttgcgccgc
gacggccatgcactggccaatatggcggtgttgtatcgttccaacgcccagtcgcgggtg
ctggagcatgcgctgtttcaggctggcttgccgtatcgggtgtatggcggcctgcgtttt
ttcgagcgccaggaaatcaagcatgcgctggcgtatttgcggctggtggccagcccggaa
gacgacaatgccttgttgcgggtgatcaatgtgccggcgcgtggtattggcgcacgcacg
gtggaaaacctgcaaaccgcctcgcgtgagcgcggcgtcagcctgtggcaggccgcgtgc
ggccagggcggtgggcgcagcgccgccagcctgggcaagtttgtgctattgattgaacag
ctgcgtcaggatgcgctgcgtttgtcatttgcccaactggtcagccacctgatagatttc
agcgggctgcgtgcgatgtatcagagcgacaaggacggcggcgaagagcggctggagaac
ctggacgaactgatttccgccgcagtgagctttgccccggaagatccggcgcagattatt
gccgagtttctggcgcatgcgtcgctggaagccggcgagcatcaggccggtgccggcgag
gatgcgtttcagctgatgaccgttcacgccgccaaggggctggagtttgactgtgtgttt
gtgtctggtctggaagaggggctgtttccacatgaaaatgccctgaacgaccgccacggc
atcgaagaagaacgccggttgatgtatgtggcaattacccgcgcccgtcagcgcttgtat
ttgacgcaagcgcaacaacgtatgctgcacggtcagacccgttatccgctgccgtcacgt
ttcatggatgaaattccgccagcgctgacgaaaaatctctccgaaagcatgacggctggc
ttatcatcgcgccacgcgcccgcgacgacgcgcgcgccggccgcgcgcagcagcggcccg
gcccggcaggaactgcccggcggctggcgcattggccagtcggttgctcacccgaaattt
ggcgtcggtgttatcctgaacgccgaagccctgggcgaagaactgcggctgtatgtaaat
tttgccgagcatggcgccaaatggctggacatgcgttttgccaaactgacccctgcctga
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