Aquaspirillum sp. LM1: BXU06_01130
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Entry
BXU06_01130 CDS
T04696
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aql
Aquaspirillum sp. LM1
Pathway
aql03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BXU06_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aql03021
]
BXU06_01130
03400 DNA repair and recombination proteins [BR:
aql03400
]
BXU06_01130
Enzymes [BR:
aql01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BXU06_01130
Transcription machinery [BR:
aql03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BXU06_01130
DNA repair and recombination proteins [BR:
aql03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BXU06_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AQR63825
UniProt:
A0A1U9JI89
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All DBs
Position
245644..246630
Genome browser
AA seq
328 aa
AA seq
DB search
MQNSASEFLKPRLIDVQPVSATQARVTMEPFERGYAHTLGNALRRILLSSMPGFAPTEVS
IAGVLHEYSALDGVREDVVDILLNLKGVVLKLHGRDSVLLTLKKEGEGPVLAGDIELPHD
VEVVNPDHPICHLAANGKIEMEIKVEKGRGYQPVATRVNQDDNRTIGNILLDASFSPVYR
VSFTVENARVEQRTDLDRLVMDIETNGVIEPEEAVRAAARILMDQLSIFADLQGTAVEVE
EVRAPQVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGMKLENWPPAGLDKQP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcgcttcggaatttctcaaaccgcgtctgatcgacgtgcagccggtttcg
gctacgcaagcgcgagtcaccatggagccgttcgagcgtggctatgcccataccctgggt
aatgcgctgcgccgcatcctgctgtcgtccatgccgggttttgcgccgaccgaagtgtct
atcgctggcgttttgcatgaatactccgcgctcgacggcgttcgggaagatgttgttgac
atcctcctgaacctgaagggcgtggtgctcaaacttcatggtcgcgacagtgtgctgctt
accctgaaaaaagagggtgagggccctgtgctggccggcgatatcgagctgccgcatgat
gtcgaagtggtgaatccggatcatccgatttgccatctcgccgccaacggcaagatcgaa
atggagatcaaggttgagaaagggcggggctatcaaccggtagcaacgcgcgtcaaccag
gatgataaccgcaccattggcaacattctgctggatgcctcgttcagcccggtctaccgt
gtcagcttcacggtggaaaatgctcgtgttgagcaacggactgatcttgaccgtctggtg
atggacatcgaaaccaatggcgtgatcgagccggaagaagcggtgcgcgctgccgcgcgt
atcctgatggatcagttgtccatcttcgccgatctccagggcactgctgtcgaagtggaa
gaagtccgcgctccgcaggtcgatccgattctgctgcgtccggtggacgaccttgagctg
actgtccgctctgccaactgcctgaaggcagaaaacatctattacatcggcgatctgatt
cagcgcaccgagaccgagttgctcaagaccccgaacctgggtcgcaagtcgctcaatgaa
atcaaggaagtattggcttccaagggtctgacgctgggcatgaagctggaaaactggccg
ccggcagggctggacaagcagccgtaa
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