Aquaspirillum sp. LM1: BXU06_07250
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Entry
BXU06_07250 CDS
T04696
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aql
Aquaspirillum sp. LM1
Pathway
aql03410
Base excision repair
aql03430
Mismatch repair
aql03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BXU06_07250
03430 Mismatch repair
BXU06_07250
03440 Homologous recombination
BXU06_07250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aql03400
]
BXU06_07250
DNA repair and recombination proteins [BR:
aql03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BXU06_07250
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BXU06_07250
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BXU06_07250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
DUF2065
Motif
Other DBs
NCBI-ProteinID:
AQR64884
UniProt:
A0A1U9JLB6
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Position
1680326..1682020
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AA seq
564 aa
AA seq
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MTRIAARAVPDTARQALCAQGLPDLFARLYAARGVTDSHQLDPSLKHLLPYHTLKDIGPA
AVRLADAIARQERLLVVADYDADGATACALAVRGLRRFGAQVEFIVPNRFEYGYGLTPEI
VELAAQRRPDLLITVDNGVASVAGVQAARARGMDVLITDHHLAGDELPDALIVNPNQPGC
PFPSKHLAGVGVMFYVLMALRAELRQRGAFAGGEEPNLADWLDLVALGTVADVVKLDDNN
RILVEQGLRRMRAGRACAGVNALFAASGRQARRASTVDLGFMLGPRLNAAGRLDDMSLGI
ACLLTDDAGHALALAGELDRLNKERRHIEAGMQEEALAHLAGVDPQGRSTLCLYRDDWHQ
GVVGIVASRLKERFHRPTLIFAPGDEGEVKGSGRSIPGFHLRDALDRVAKQHPDLLRKFG
GHAMAAGVTLAEADLPRFISAFEAVGQDWLTPAQLTRTIETDGSLAVGDIRMDTADQLAA
NVWGQGFPPPSFYDRFRLLDQRRVGERHLKLKLGRDGVEFDAMLFNCPDWLPAWIDVVYQ
LNVNEWRGERNLQLMVDNWQAAAG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattgctgcacgggccgtacccgatacggcccggcaggccctgtgtgcgcag
ggtttgccagatttgtttgcccgtttgtacgcggcgcgtggcgtgaccgacagccaccag
ctcgaccccagtcttaagcacctgctgccctaccacaccctcaaggatatcggcccggcg
gcggtgcggctggccgatgccattgcccgccaggaacgcctgctggtggtggccgactac
gacgccgacggtgccaccgcctgcgcgctggcggtgcgcggcctgcgccggtttggcgcg
caggtggaatttatcgtccccaaccgctttgaatacggctatggcctcaccccggaaatt
gtcgaactggccgcccagcgccgcccggatttgctgattaccgtggataacggcgtggcc
agcgtggccggtgtgcaggcggcgcgcgcgcgcggcatggacgtgctgattaccgaccat
cacctggccggcgacgaactgcccgatgcgctgatcgtcaaccccaaccagccgggctgc
ccgtttcccagcaagcacctggccggcgtgggggtgatgttttatgtgctgatggcgctg
cgcgccgagctgcgccagcgcggtgcctttgccggcggcgaagaacccaatctggccgac
tggctggacctggtggcgctgggcacggtggccgacgtggtgaagctggacgacaacaac
cgcattctggtcgaacagggcctgcgccgcatgcgtgctggccgcgcctgcgccggggtg
aatgcgctgtttgccgccagtggccgtcaggcgcgccgcgccagcacggtggacctgggc
ttcatgctcggcccccggctgaacgccgcaggccggctggacgacatgagcctgggcatt
gcctgcctgctgaccgacgacgccggccacgcgctggcgctggctggcgagctggaccgg
ctgaataaagaacgtcgccatatcgaagccggcatgcaggaagaagcgctggcgcatctg
gccggggtggatccacaaggccgctcgacgctatgcctgtaccgcgatgactggcaccag
ggcgtggtgggcattgttgccagccggctgaaagagcgctttcatcggcccacgctgatt
tttgctcccggtgacgaaggcgaagtgaaaggctcgggacggtcgattccgggttttcat
ctgcgcgacgcgctggaccgggtggccaaacagcacccggatttattgcgcaagtttggt
ggccacgccatggccgccggggtgaccctggccgaggcggatttaccgcgctttatcagc
gcgtttgaggccgtggggcaagactggctgaccccggcacaactgacccgcaccatcgaa
accgacggcagcctggcggtgggtgacatccgcatggacaccgccgaccagctggccgcc
aatgtctggggccagggctttccaccgccgtcgttttacgaccgcttccgcctgctcgac
cagcgccgggtgggcgaacgccatctgaaactgaaactgggccgcgacggcgtggagttt
gacgccatgctgtttaactgcccagactggctgccggcctggattgacgtggtgtatcag
cttaatgtgaatgaatggcgcggcgaacgtaacttgcagctgatggtggataactggcaa
gcggctgcgggctag
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