Aquaspirillum sp. LM1: BXU06_10300
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Entry
BXU06_10300 CDS
T04696
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aql
Aquaspirillum sp. LM1
Pathway
aql03030
DNA replication
aql03430
Mismatch repair
aql03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BXU06_10300
03430 Mismatch repair
BXU06_10300
03440 Homologous recombination
BXU06_10300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aql03032
]
BXU06_10300
03400 DNA repair and recombination proteins [BR:
aql03400
]
BXU06_10300
Enzymes [BR:
aql01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BXU06_10300
DNA replication proteins [BR:
aql03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BXU06_10300
DNA repair and recombination proteins [BR:
aql03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BXU06_10300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
DUF7504
DUF7398
Motif
Other DBs
NCBI-ProteinID:
AQR65404
LinkDB
All DBs
Position
2384626..2388066
Genome browser
AA seq
1146 aa
AA seq
DB search
MTTPRFVHLRLHSEFSITDGIVRLDDAVGRAAADGMPALGVSDLANLFGMVKFYKTSRGQ
GIKPVVGVDAWIENPDDRDAPFRLLLIARDHPGYLILCQLLTDAYRTHQYHGRAELKRDW
LSPERCRHLLALSGAQMGDVGRALLEGNLPAAQAAAADWSARFGDGFYLEVQRYGAPHCD
TLVERTLWLAGEAGLPVVATHPIQFMDRDDYKAHEARVCIAKGEILGDRRRPRLFTEDQY
FKTTAEMAELFADLPEALANSVEIAKRCNVTIQLGKNYLPDFPTPDGMTLDEYLIHRANE
GLMERMQALYPDPAAREAELPRYRDRLKFELDTIIQMGFPGYFLIVADFINWAKHNGCPV
GPGRGSGAGSLVAYSIGITDIDPLAYALLFERFLNPERVSMPDFDIDFCQDNRWRVIEYV
RDKYGADAVSQIVTFGTMAAKAVVRDVGRVLDLPYMFCDGLSKLIPAAPGKQYSLDDAVE
MEPILKDRLEHEEEVAELWVLAKKLEGLTRNIGMHAGGVLIAPGKITDFCPMYQASGEDA
SPVSQFDKDDVEQVGLVKFDFLGLRNLTIIDLAVRYIKALQPDFSIDLNTMPFTDPAAYK
VLQEANTTAVFQLESDGMKKLLEKLKPDRFEDIIAVLALYRPGPLGSGMVDDFILRKAGK
QAVDYFHPDLTACLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKPEEMAKH
RSIIAEGAKTKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVVSYQTAWLKAHYPSAFM
AATMSSELDNTDQLRVFYDDCIKNKLKFLAPDINHSHYRFVPTDRQHIRYALGAIKGTGE
AAVAHLIAEREANGPFVDLFDFCRRTDKRVVNRRAIDTMIRAGAFDGLDTHRAKLLANVE
LAMSLAEQAAANINQGGLFDDFDDSAAPPVRMVEVPAWTEAQRLSEEKLAIGFYLSGHPF
TAYAAAVRRFAKATLASLSPKKDLQTLAGVVTSVRTKVGGRGKMAFVQLDDATAKQDVSL
FSEAFEAHRHKLREDAVLIVEGKVSYDDFSGGLRIIAENVYDLAEAQSRFAQHLALTLTD
NCDVTKLKHLLQPFAGSGACPLRFRYSGSQARCELDAGDDWRVLLSDPLLDSLRALLGEK
AVEVVM
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgactaccccgcgctttgtacatctccgcctccattccgagttttccatcaccgacggc
attgtgcgtctggatgacgctgtgggccgcgctgcggccgatggcatgccggctttgggg
gtttccgatctggccaacctgtttggcatggtcaagttttacaaaaccagccgaggccag
ggcatcaagcccgtggttggcgtggatgcctggattgaaaacccggacgaccgcgatgcg
ccgttccggctgctgctgattgcccgcgaccatccgggctatctgattttgtgccagctg
ctgaccgacgcctaccgcacccaccaataccatggccgcgccgagctcaagcgcgactgg
ctcagcccggaacgctgccgccacctgctggcgctatcgggcgcgcagatgggcgatgtg
ggccgggcgctgctggagggcaatctgccggcggcgcaggcggcggcggcagactggtcg
gcgcggtttggcgatgggttttatctggaagtgcagcgctatggcgcgccacactgcgac
acgctggtggaacgcacgctgtggctggctggcgaggccgggctgccggtggtggccacc
catccgatccagtttatggaccgcgacgactacaaagcgcatgaagcgcgggtgtgcatc
gccaagggtgaaatcctgggcgaccgccgccggccccggctgtttaccgaagaccagtat
ttcaagaccacggcagaaatggccgagctgtttgccgacctgccggaagcgctggccaac
tcagtggaaattgccaagcgctgcaatgtcaccatccagctgggcaagaactacctgccg
gatttccccaccccggatggcatgacgctggatgagtatttgattcaccgcgccaacgaa
gggctgatggagcgcatgcaggcgctctaccccgaccccgccgcgcgcgaagccgagctg
ccgcgctaccgcgaccggctgaagtttgagctggataccattatccagatggggtttcct
ggttattttttgatcgtggccgactttatcaactgggccaagcacaacggctgcccggtg
gggccgggccggggctcgggcgcgggttcgctggtggcctatagcattggcattaccgac
atcgacccgctggcctacgcgctgctgtttgaacgctttttgaacccggaacgggtgtcg
atgcctgactttgacatcgacttctgccaggacaaccgctggcgggtgattgagtacgtg
cgcgacaaatacggcgccgacgcggtgagccagattgtgactttcggtaccatggcggcc
aaggcggtggtacgcgacgtgggccgcgtgctggatttgccgtatatgttttgcgatggc
ctgtccaagctgattccggccgcaccgggcaaacagtacagcctggacgacgcggtggag
atggagcccatcctcaaggataggctggagcacgaggaagaagtggccgagctgtgggtg
ctggcaaaaaagctggaaggcctcacccgcaatatcggcatgcacgccggcggcgtgctg
attgcaccgggcaagattaccgatttttgcccgatgtaccaggccagcggcgaagacgcc
agcccggtcagccagtttgacaaggacgatgtggaacaagtcggcctggtgaagttcgac
tttctgggcctgcgcaacctgaccatcattgatctggcggtgcgctacatcaaagcgttg
cagccggatttcagcatcgacctgaacaccatgccgtttaccgacccggcggcgtacaag
gtattgcaggaggccaacaccacggcggtgttccagctggaatccgatggcatgaaaaag
ctgctggaaaagctcaaacccgaccgctttgaagacatcatcgctgtgctggcgctgtac
cgccccggcccgctgggctcgggcatggtggacgactttatcttgcgcaaggccggcaag
caggcggtggattacttccaccccgacctgaccgcctgcctggaaccgacttatggcgtg
attgtgtatcaggaacaggtgatgcagatctcgcagattatcggtggctacacgctgggc
ggtgccgatatgctgcgccgggcaatgggcaagaaaaagccggaagaaatggccaagcac
cgcagcattattgccgaaggggccaagaccaagggctacgatccggcgctggccgagcag
ttgtttgacctgatgaccaagtttgccgagtacggctttaacaagtcgcacacggcggcc
tacgcggtggtgagctaccagaccgcctggctgaaggcgcattatccgtcggcatttatg
gcggccaccatgtccagtgaactggacaacaccgaccagctgcgggtgttttacgatgat
tgcattaaaaacaagctgaagtttctggccccggacatcaaccacagccattaccgcttt
gtgccaaccgaccgccagcatatccgctacgcgctgggcgcgatcaagggcactggcgag
gcggctgtggcgcatctgattgccgagcgcgaggccaacggcccgtttgtcgatctgttt
gacttctgccggcgcaccgacaagcgagtggtcaaccgccgcgccatcgataccatgatc
cgcgctggcgcgtttgacgggctggatacacaccgcgccaagctattggccaatgtggag
ctggcaatgagcctggccgagcaggcagcggccaatatcaatcagggtggcttgtttgat
gattttgacgacagcgccgcgccgcctgtgcgcatggtggaggtgccagcctggaccgag
gcccagcgcttgtcggaagaaaaactggcgatcgggttttacctgtccggccacccgttt
accgcctacgccgcagcagtacgccgctttgccaaggccacactggccagcctgagcccg
aaaaaagacctgcaaaccctggctggggtggtgacttcggtgcgcaccaaggtgggcgga
cgcggcaagatggcgtttgttcagctggacgatgctaccgccaaacaggatgtatcgctg
ttttccgaggcatttgaagcgcatcggcacaagctgcgcgaagacgcggtgctgattgtg
gaaggcaaggtcagctacgatgatttttctggcgggctgcgcatcatcgccgaaaatgtc
tacgatctggccgaggcgcaaagccgctttgcccagcatctggcgctgacactgaccgac
aactgcgacgtgaccaagctcaagcacctgctgcagccgtttgccggcagcggtgcctgc
ccgctgcgctttcgctacagcggcagccaggcccgctgcgaactggacgctggcgacgac
tggcgcgtgctgctcagcgacccgctgctggacagcctgcgcgcgctgctgggtgaaaaa
gccgtggaagtggtgatgtaa
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