Aquaspirillum sp. LM1: BXU06_13840
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Entry
BXU06_13840 CDS
T04696
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aql
Aquaspirillum sp. LM1
Pathway
aql03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BXU06_13840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aql03400
]
BXU06_13840
Enzymes [BR:
aql01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BXU06_13840
DNA repair and recombination proteins [BR:
aql03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BXU06_13840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
COMM_domain
Motif
Other DBs
NCBI-ProteinID:
AQR66014
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All DBs
Position
3185606..3186376
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AA seq
256 aa
AA seq
DB search
MQRIISANLNGIRSAHQKGFFDWLATQQADIVCVQELKAQHADLTERMRAPDGLTGWFHC
AEKKGYSGVGLYARREPDRLDVGLGIADIDAEGRYLRADFGPLTVVSLYLPSGSSSDERQ
QVKFAFLERFLPYLVELLASGREVVVCGDWNIAHQEIDLKNWKGNLKNSGFLPEERAWMT
QLLGEVGWRDVWRLLYPDQPGYTWWSNRGQAYAKDVGWRIDYQIASPALAARAHSASVYK
GEKFSDHAPLIVDYAD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacgaatcatcagcgccaacctcaacggcatccgctccgcccaccagaaaggtttt
ttcgactggctggccacccagcaggccgatattgtctgtgtgcaggagctcaaggcccag
cacgccgacttgaccgagcgcatgcgcgcgcccgacggcctgaccggctggtttcactgc
gccgagaaaaaaggctacagcggcgtggggctgtatgcccggcgcgaaccagaccgtctg
gacgtggggctgggcattgccgacatcgacgccgaaggccgctacctgcgcgccgacttt
ggcccgctgaccgtggtgtcattatacctgccgtctggctccagctcggacgagcgtcag
caggtgaagtttgcctttcttgaacgcttcttgccgtatctggttgagctgctggccagt
ggccgtgaagtggtggtgtgtggcgactggaatatcgcccatcaggaaatcgacctgaaa
aactggaaaggcaatctgaaaaacagcgggtttctgcctgaagaacgggcatggatgacc
cagctgctgggcgaggtgggctggcgcgatgtgtggcggctgctttacccggatcagccc
ggctacacctggtggagcaaccgtggccaggcctacgccaaggatgtgggctggcggatt
gattaccagattgccagcccggcgctggcggcgcgggcgcacagcgccagcgtgtacaag
ggagaaaagttttccgaccatgcgccgctgattgtcgattacgccgactga
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