Aquaspirillum sp. LM1: BXU06_16455
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Entry
BXU06_16455 CDS
T04696
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aql
Aquaspirillum sp. LM1
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aql03016
]
BXU06_16455
Enzymes [BR:
aql01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BXU06_16455
Transfer RNA biogenesis [BR:
aql03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BXU06_16455
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AQR66462
UniProt:
A0A1U9JQT0
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Position
complement(3787886..3789808)
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AA seq
640 aa
AA seq
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MNVFYEEDGAFKVGAVMSTTDASLQVEAPHGKRSKIKAAAVLLKFTSPLADFLPAAETAA
NDIDVDFLWECCGSDEFGFEALAADYWGHAPSAVEAAAIALRLHGAPMYFYRKGRGHYKA
APEDTLKAALAGQEKRRQQQLQIDEWAATLCAGTIPDVLRSQLMTLLHRPDKNTLEWKAL
DAASRDANQPPLRLIAAAGGIPSVPDYLLAGFLMEHFPKGRGFPACAPATPAPDALEDAG
VQAFSIDDAATTEIDDAFSLSRLDNGNWRVGVHIAAPTLGIDVDSDLEKLVYNRLSTVYF
PGDKITMLPDDVVSQFTLKEGETCPAVSMYLEVSPDFTVLSHHSRVDRVFVAANLRHDTL
EPLFNEDTLANDPGVDYPYKAELRWLWEFANALEVRRGKADPTRPPQLDYNFAIEDGKVI
ITRRKRGSPMDKLVSELMILVNCEWGGALDRAGFPAIYRAQTQGKVKMVTTAQPHVGLGV
AQYAWSSSPLRRAVDFVNQRQIVAMIREQPPVFAPGDAKLFGILRDFDAAYSAYNQFQDQ
MERFWCLRWFTQEGIDTLQASWIKEDLIRIDGLPMVTRLAGLPDGLQAGDKVRLAIVRID
ELTLDVEFRVLGRVGDVPAAQEADAPATADGGQADATPAG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgttttacgaagaagacggcgctttcaaggttggcgcggtaatgtccaccacc
gatgccagcctgcaggtggaagccccgcacggcaagcgcagcaaaatcaaggcggcggcc
gtgctgctgaaatttacctcgccgctggcggattttttgcctgcggcagaaaccgctgcc
aacgacatcgacgtggatttcctgtgggaatgctgcggcagtgatgaatttggctttgaa
gcgctggctgctgactactggggccatgcaccgtcggcagtggaagccgccgcgattgcc
ctgcgcctgcatggcgcgccgatgtacttctatcgcaaaggccgtggccactacaaggcc
gcgccggaagacaccctcaaggccgcgctggccggtcaggaaaagcgtcgccagcagcag
ctgcaaatcgacgaatgggccgccaccctgtgcgccggtaccatccccgacgtgctgcgc
agccagctgatgaccctgctgcaccgcccggacaagaacaccctggaatggaaagccctg
gacgccgccagccgcgacgccaaccagccgccgctgcgcctgattgctgccgctggcggc
attccgtcggtgccagactatctgctggccggcttcctgatggaacattttcccaaggga
cgcggcttcccggcctgcgccccggccaccccggcccccgacgcgctggaagacgctggc
gttcaggcgttttcaattgacgacgccgccaccaccgaaatcgacgacgccttctcgctg
tcccggctggataacggcaactggcgcgtgggcgtgcatattgccgcgccaacgctgggc
attgacgtggacagcgacctggaaaaactggtgtacaaccgcctgtccaccgtgtacttc
cccggcgacaagatcaccatgctgcccgacgacgtggtcagccagttcaccctgaaagaa
ggcgaaacctgcccggcggtgagcatgtaccttgaagtgagccccgactttaccgtgctg
agtcaccacagccgggtagaccgggtgtttgtcgccgccaacctgcgccacgacacactg
gagccgctgttcaacgaagacaccctggccaacgaccccggcgtggactacccgtacaag
gccgagctgcgctggctgtgggagtttgccaatgcactggaagtgcggcgcggcaaggcc
gaccccacccgcccgccgcagctggactacaactttgccattgaagacggcaaggtgatc
atcacccggcgcaaacgcggttcgccaatggacaagctggtgtccgagctgatgattctg
gtcaactgcgaatggggcggcgcgctcgaccgcgccggcttcccggccatttaccgtgcg
cagacccagggcaaggtgaagatggtcaccaccgcccagccgcatgtgggtctgggcgtg
gcgcaatacgcctggtccagctcgccgctgcgccgcgcggtggactttgtcaatcagcgc
cagattgtggcgatgatccgtgaacagccgccggtgtttgcaccgggcgacgccaagctg
tttggcatcctgcgcgacttcgacgccgcttacagtgcctacaaccagttccaggaccag
atggagcgcttctggtgcctgcgctggtttacccaggaaggcatcgacaccctgcaggcc
agctggatcaaggaagatctgatccgcattgacggcctgccgatggtcacccgcctggct
ggcctgcccgacggcctgcaagctggcgacaaggtgcgcctggcgattgtgcgcatcgac
gaactgaccctggatgtggaattccgcgtgctgggacgggtgggcgatgtgccggctgcg
caggaggctgacgcgccggcaaccgccgatggcggccaggccgacgccacgccagcaggc
tga
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