Aquaspirillum sp. LM1: BXU06_17175
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Entry
BXU06_17175 CDS
T04696
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aql
Aquaspirillum sp. LM1
Pathway
aql03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BXU06_17175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aql03400
]
BXU06_17175
Enzymes [BR:
aql01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BXU06_17175
DNA repair and recombination proteins [BR:
aql03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BXU06_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
SH3_13
Helicase_RecD
UvrD-helicase
SLFN-g3_helicase
NTPase_1
PhoH
AAA_16
ATPase
AAA_5
T2SSE
UvrD_C
AAA_28
AAA_29
AAA_25
nSTAND3
DEAD
TrwB_AAD_bind
NACHT
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AQR66592
UniProt:
A0A1U9JR60
LinkDB
All DBs
Position
3945668..3947728
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AA seq
686 aa
AA seq
DB search
MAQAMAYGTPAPTPHRFTRWMRCLPASPCQEPTMLTFDALWTLLDTWETHRWLRPLDGRF
ARFLAELDPQAAPELLLAAALASHQLGRGHPCLDLSTLAAGAALDHVLGLPPEGDSSPAP
SLPPLWPWPAAESPLLAVVGRDDATRRESPLVRDGERLYLRRYWQYEQDVALALHQRAQP
EHATLPVLPVLPDWLQQGQADGQSADWQQLACALALRGRLTLITGGPGTGKTTTVVRLLA
LLQSQALAAGQPALRIRLAAPTGKAAARLSESLGGACQRLAGVVSPEVLASIPPSVSTVH
RLLGSRPDSRRFRHHRDAPLHADVVVIDEASMIDLEMMAAVLDALPEPARLILLGDKDQL
ASVEAGAVLGQLCANAEQGGYSPAALAWLNAADRQQHDLSRFAADPARPAPPLADCTVML
RHSHRFDQHSGIGQLAQAVRDNQPDQLKQVWQRHQDIERLALSGEHDAQLASFVLAGYRP
VLSAVQHALAASASDDDWHSWAAGCLQRFARFQLLTALRRGPWGVEGLNQRVSTVLADAG
LIDPRRDWYVGRPVILTRNDHALGLMNGDIGLTVADRQGQLQVIFAQAGQVRWISPLRLP
DVDTVFAMTVHKSQGSEFDHAALILPDHPGPLLTRELVYTAITRAKTRFTLLEAQVGLLE
LAAQTVTRRESGLGASLLALANRVPG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggccatggcgtatggcacgcctgccccgacgccgcacagattcacgcgctgg
atgcgctgtttgccggccagcccctgccaggagccaaccatgctgacctttgacgcactg
tggactctgctcgacacttgggaaacccaccgctggctgcgcccgctggatggccgcttt
gcccgctttctggccgagctcgatccgcaggcggcaccggagctgttgctggctgccgca
ctggccagccaccagctgggccggggccatccctgtctggacctgagcaccctggctgcc
ggtgcagcattggaccatgtgctgggcctgccgcccgagggcgacagcagcccggccccc
agcctgccgccgctgtggccctggccggcggcagagtcgccgctgctggccgtggtgggg
cgcgatgacgccacccggcgcgaatcgccgctggtgcgcgacggcgagcggctgtatctg
cgccgctattggcaatacgagcaggacgtggcgctggcgctgcaccagcgtgcccagcct
gaacatgccacgctgccggtgttgccggtgttgccggactggttgcagcagggccaggcc
gacggccagtctgccgactggcagcaactggcctgcgcgctggcattgcgcggacggctg
acgctgattaccggcgggccaggcaccggcaaaaccaccaccgtggtgcgcctgctggcg
ctgttgcaaagccaggcgctggcggcgggccaacctgccctgcgcatccgtctggccgcc
cccaccggcaaggcggcggcgcggctgagtgaatcactggggggggcctgccagcgtctg
gccggtgtggtcagccccgaggtgctggccagcattccgcccagcgtcagcaccgtgcac
cgcctgctgggcagccgcccggacagccggcgctttcgtcatcaccgcgatgcgccgctg
cacgccgacgtggtggtgattgacgaagcctcgatgattgatctggaaatgatggccgcc
gtgctcgacgccctgcccgagcccgcccggctgattctgctgggcgacaaggaccaactg
gcatcggtggaagccggtgccgtgctgggccagctgtgcgccaacgccgagcaaggcggc
tattcccccgccgcactggcctggctcaatgccgccgaccgccagcaacacgacctcagc
cgctttgccgccgatcccgcccgcccggccccgccgctggccgactgcacggtgatgctg
cgccattcccaccggtttgatcagcacagcggcattggccagctggcccaggcggtgcgc
gacaatcagcctgaccagttgaaacaggtgtggcaacgccatcaggatatcgagcgcctg
gcgctgtctggcgagcatgatgcgcagctggccagttttgtgctggccggctaccgcccg
gtgctcagcgccgtgcaacacgcgctagcggccagcgccagcgacgacgactggcacagc
tgggccgccggctgcctgcaacggtttgcccggtttcagctgctcaccgcgctgcgccgt
ggcccatggggcgtggaagggctgaatcaacgggtcagcaccgtgctggccgacgccggc
ttgatcgacccgcgccgcgactggtacgttggccgcccggtgatcctcacccgcaatgac
cacgcgctggggctgatgaacggcgacatcggcctgaccgtggccgaccgccagggccag
ctgcaggtgatttttgcccaggccggccaggtacgctggatctcgccgctgcgcctgccc
gacgtggacacggtgtttgccatgaccgtgcataaatcccagggctcggaattcgaccac
gccgcgctgatcctgcccgaccaccccggcccgctgctcacccgcgaactggtgtacacc
gccatcacccgcgccaaaacccgcttcaccctgctggaagcccaggtgggcctgctggag
ctggcagcacaaaccgtcacccggcgcgaaagcgggctgggggcgagtttgctggcgctg
gccaaccgtgtgcccggatga
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