KEGG   Aegicerorhabdus qinzhovensis: WDB71_15020
Entry
WDB71_15020       CDS       T11646                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
aqn  Aegicerorhabdus qinzhovensis
Pathway
aqn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aqn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WDB71_15020 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aqn03021]
    WDB71_15020 (rho)
   03019 Messenger RNA biogenesis [BR:aqn03019]
    WDB71_15020 (rho)
Transcription machinery [BR:aqn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     WDB71_15020 (rho)
Messenger RNA biogenesis [BR:aqn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     WDB71_15020 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB S1CSD-TOTE-2 AAA_25 AAA_22 AAA Spore_III_AA
Other DBs
NCBI-ProteinID: WYI69117
LinkDB
Position
3095825..3097090
AA seq 421 aa
MNLTELKRMPVSELVQLAESMGLENMARARKQDIIFGILKAHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTITGKIRPPKEGERYFALLKVNQVN
FDRPENARNKILFENLTPLHAQERMRMERGNGSTEDITARVLDLSAPIGKGQRALIVAPP
KAGKTILLQNIAQSIAANNPDAELMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRREELLATPEELQKMWILRKILHPMEEIGAMEFLIDKLSMTKTNDEFFEAMKRTK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaagagaatgccagtctccgagctggtgcagctggccgagtcc
atgggcctggaaaacatggcccgggcccgcaaacaagacatcatctttggcatcctcaag
gcccacgccaaatccggcgaagacatcttcggtgacggggttctggaaatcctccaagac
ggcttcggtttcctgcgtagcgccgattcctcctacctggccggtcccgacgatatctat
gtctcccccagccagatccgccgtttcaacctacgcaccggcgataccatcaccggcaag
atcaggccccccaaggaaggcgaacgctacttcgccctgctgaaggtcaatcaggtcaac
ttcgaccgcccggaaaacgcccgcaacaagatcctcttcgaaaacctcacccccctccat
gcccaggaacgcatgcgcatggaaaggggcaacggcagcaccgaggacatcaccgcccgg
gtactggatctgtccgcccccatcggcaagggccagcgcgccctgatcgtggcgccgccc
aaggccggtaagaccatactgctgcagaacatcgcccagagcatcgccgccaacaacccg
gacgccgagctgatggtactgctcatcgacgaacgtcccgaggaagtgaccgagatgcag
cgcctggtcaagggcgaggtggttgcctccaccttcgacgagcccgccagccgccacgta
caggtggccgaaatggtcatcgaaaaggccaagcgcctggtcgagcacaagaaggacgtg
gtgatcctgctcgactccatcacccgcctggcccgcgcctacaacaccgtcgtgcccagc
tccggcaaggtactcacaggtggtgtcgacgccaacgccctgcacaggcccaagcgcttc
ttcggcgccgcccgtaacgtcgaggaaggcggcagcctgaccatcatcgccaccgccctg
atcgacaccggctccaagatggacgaagtcatctacgaggagttcaagggcaccggcaac
atggaactgcacctgtcccgcaagatagccgaaaagcgcgtcttcccggccatcgacttc
aaccgctccggcacccgccgcgaggagctgctggcgaccccggaagagctgcagaagatg
tggatcctgcgcaagatcctccaccccatggaggagatcggtgccatggaattccttatc
gacaagctgtccatgaccaagaccaacgacgagttcttcgaagccatgaagcgcaccaag
agctga

DBGET integrated database retrieval system