Aquimarina sp. TRL1: HN014_11565
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Entry
HN014_11565 CDS
T10158
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aqr Aquimarina sp. TRL1
Pathway
aqr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HN014_11565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqr03019
]
HN014_11565
03016 Transfer RNA biogenesis [BR:
aqr03016
]
HN014_11565
Enzymes [BR:
aqr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HN014_11565
Messenger RNA biogenesis [BR:
aqr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HN014_11565
Transfer RNA biogenesis [BR:
aqr03016
]
Prokaryotic type
tRNA degradation factors
HN014_11565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH_2
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
QKX05524
UniProt:
A0A7H8PMD8
LinkDB
All DBs
Position
complement(2880902..2883091)
Genome browser
AA seq
729 aa
AA seq
DB search
MIPKVYKEVIDLGDGREISLETGKLAKQAHGSVVVKMGNAMLLCTVVSSYEDGTVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSTEEILTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDENVMPDALAGLAASTALQLSDIPFETPISEVRVARIDGAFVINPSREQLEKADIDLMV
GASADSVAMVEGEMDEVSEEEMTEAIKFAHEAIKIQCDAQIRLAEAVGKKETREYTPEEN
DEELATQIHEAAYQRCYDIAKQGSSKKERGLAFSEVKEEILATFSEEEIEEKGELIAKYF
NKAHKEAVRNLVLNEGIRLDGRATTEIRPIWCEVDYLPSTHGSSIFTRGETQALATVTLG
TSREANVIDLPTFQSEERFYLHYNFPPFSTGEARPLRGTSRREIGHGNLAQRALKGMIPE
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDAGVKLKKPVSGIAMGLISDGEKYAVLS
DILGDEDHLGDMDFKVTGTADGITACQMDIKIKGLSYEILVNALKQAREGRLHILEKLTD
TIEQPSETVKAHAPKMVKVTIPESYIGAVIGPSGKVIQEMQKESGTTIVIEEDGDFGIVE
ILGVDQEAIDWVISRINAITFKPEVGSVYEVKVVKILEFGAVVEYVEAPGNEVLLHISEL
AWERTNNVTDVVNMGDLIDVKYFGIDPKTRKEKVSRKALLQRPPRKEGKPGGNRDNRDNR
KPKPEKKES
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtgtataaagaggttatcgacttaggagatggaagagaaatctccctc
gaaaccggaaaattagcaaaacaagctcatgggtctgttgttgttaaaatgggaaatgct
atgctactatgtactgttgtttcttcttatgaagatggtacagtagatttccttccttta
actgttgattatagagaaaaatttgctgctgcaggacgttatcctggagggttctttaaa
agagaggcaagacctagtacggaagaaattttaacaatgagattagtggatcgtgtttta
cgtccattgtttccaaaagattatcactcagaaactcaggtaatgatacagctgatgtca
catgatgaaaatgtgatgcctgatgcattagcaggattagctgcttctactgcacttcag
ctatctgatattccttttgaaacccctatttctgaagttcgtgttgctagaattgatgga
gcatttgttatcaatccaagcagagagcaattagaaaaagcagatatcgatcttatggtt
ggggcatcggctgattctgtagcgatggtagaaggagaaatggatgaagtttctgaagaa
gaaatgactgaagcgatcaaattcgcccatgaagctatcaaaatacaatgtgatgcacaa
atacgattagcagaagctgttggaaaaaaagaaaccagagaatatactccggaagaaaac
gacgaagaattagctactcaaattcatgaagctgcttatcagagatgttatgacattgct
aagcaaggatcttctaaaaaagaacgaggattagctttttctgaagtaaaagaagaaatc
ttagctactttctctgaagaggaaatcgaagagaaaggagaactaatcgctaaatatttt
aacaaagcacacaaagaagctgttagaaacttggtccttaacgaaggaattcgtctggac
ggaagagcaactactgaaatcagacctatctggtgtgaagtagattaccttccttctaca
catggttcttcaatttttacaagaggggaaacacaagcactagcaactgtaacattagga
acttccagagaagcaaatgttatcgacttaccaacattccaatcagaagagcgtttctac
ctgcattataacttccctcctttctctaccggagaagcaagaccactacgtggtacttcg
agaagagaaataggacatggtaacctggcacaacgtgcgctaaagggaatgattcctgaa
gattgtccatatactgttcgtgtcgtttcagaagtattagaatcaaatggttcttcttct
atggcaacagtttgttcgggaacaatggcacttatggatgccggtgtgaaactaaagaag
cctgtttctggaattgccatgggacttatcagtgacggagaaaaatatgctgtattatct
gatatccttggagatgaagatcacttaggagatatggattttaaagtaaccggaactgcg
gatggtattacagcttgtcaaatggacatcaaaataaaagggttatcctatgaaattttg
gtaaatgccctaaaacaagccagagaaggaagacttcatatactagaaaagcttacagat
accatagagcaaccaagcgaaacagttaaggcacacgctccaaaaatggtaaaagtaact
attcctgagtcttatattggagcagttatcggacctagcggtaaggtaattcaggaaatg
cagaaagaaagcggtacaacaattgtcatcgaagaagatggtgattttggtattgtagaa
attctcggagtagaccaagaagctattgactgggtaatctccagaattaacgcaattact
ttcaaaccggaagtaggtagcgtatatgaagtaaaggtagtgaagatcctagaattcgga
gctgttgtagaatatgtagaagcaccaggaaatgaagtattacttcacatttctgaatta
gcttgggagcgtacaaataatgtaacagatgtagtaaatatgggagaccttatcgatgtg
aagtattttggtattgatccaaaaacccgcaaagaaaaagtatccagaaaagctcttcta
caaagacctcctagaaaggaaggaaaaccaggtggaaatcgagacaacagagataatcga
aagccaaaacctgagaaaaaagaaagttaa
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