Aquimarina sp. TRL1: HN014_11985
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Entry
HN014_11985 CDS
T10158
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
aqr Aquimarina sp. TRL1
Pathway
aqr02024
Quorum sensing
aqr03060
Protein export
aqr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aqr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HN014_11985 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HN014_11985 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HN014_11985 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aqr02044
]
HN014_11985 (secDF)
Secretion system [BR:
aqr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HN014_11985 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QKX05605
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Position
2988871..2991897
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AA seq
1008 aa
AA seq
DB search
MQNKGIVRVFAILFGLVCIYQLSYTYLTYTKEKEAETYAQQKYPAEDASKLREIAQRQYL
DSIGKEEIFAGISYNDAKDKELNKGLDLKGGINVILQISVKDILKGLANYSKDPSFNKAL
LATDETQKNSQNDYIDDFFKEFEKIPDAKFASPDIFANKNLSDDITYDMTNEQVKPVLKK
KINESVTSAFEVLRKRIDKFGVTQPNIQRLGESGRILVELPGAKDVDRVKKLLQSTAQLE
FWDVYKMEEVFPFLSAANNLLKEREEQQKKTADKVAETSEIASDSTKVDSTASKEDAAIA
DLLEDAEDSTNLEKAVNPLFDLIAGPGRQSGPVVVSVAIKDTAQFSAYLRDPQVRALLPV
EQRYAKFVWGKQVKDVPFLDLYALKGNRDNVAELSGGVITDARQEYNQVGQVTVTMQMDG
KGAKKWEEMTGRAFSQRSQIAIVLDDVVYSAPGVTSGPIGGGRSEITGDFDITEGQDLAN
VLRAGKLPASADIIQSEVVGPSLGQEAIDSGIMSFIIALVLILIWMIFYYGKAGAFADVA
LVVNILFIFGVLAGLKAVLTLPGIAGIVLTIGMSVDANVLIFERIREELTKGKSQKEAIK
DGFSNALSSILDANITTGLTGLILLVFGTGPIKGFATTLLIGIATSLFTAIFITRLFIDG
YGKNGKELAFSTSMTKNLFKNVNIDFIVKRKVAYIFSAIIVLAGLGSLFTQGLDQGVDFV
GGRTYTVRFAKDVVPTEVEKDLIAVFESAQAKTLGADNQLKITTKYKVNETGEEVDSEIS
NKLFSALKPYLTEGLSYEEFSNGDEDKQVGIMSSMKVGPTIADDIKQAAFWSVLGSLIVV
FLYILLRFRRWQFSLGAVTAVFHDVLVVLGVFSLTWKFMPFNMEIDQAFIAAILTVIGYS
LNDTVVVFDRIREFLGEHTGWPLRKTVNAALNSTLSRTLNTSLTTLLVLVTIFIFAVPLR
GFMFSLIIGVLVGTYSSLFIATPVMFDTVSKVGLKEKEEKPKEDLVEA
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggtattgttagggtgtttgcgattttatttggattggtgtgtatttac
caattatcgtatacatatttgacctacacaaaagaaaaagaagcagaaacgtatgcgcag
cagaaataccctgcagaagatgcttctaaattaagagaaatcgctcagcgtcaatatttg
gattctataggaaaagaagaaattttcgcgggaatcagttataatgatgcaaaggataaa
gaacttaataaaggacttgaccttaaaggaggaattaatgtgattcttcagatttcggta
aaagatattttaaaaggattagcgaattattctaaagatccttcttttaataaagcgtta
cttgctactgatgaaacacaaaaaaatagtcaaaacgattatattgatgatttcttcaaa
gaatttgagaaaattccagacgctaaatttgcatctcctgatattttcgctaataaaaac
ctgagtgatgatatcacatatgatatgacgaatgagcaggtaaaacctgttttgaaaaag
aaaataaatgagtcggtaacatctgcttttgaagtattgcgtaaacgtattgataagttt
ggggtaacacaaccaaatattcagcgtttaggagaatcaggacgtattctggtagagttg
ccaggagcaaaagatgtagatagagttaagaaactattgcaaagtacagcacagttagaa
ttctgggatgtatataaaatggaagaagtttttccttttttatctgccgcaaacaatttg
ctaaaagaaagagaagagcagcaaaagaagacagctgataaggttgcagaaacaagcgag
attgcatctgactctacaaaagtagattcgacagcatcaaaagaagatgcagcaattgca
gatcttttggaagatgcagaagattctacaaatttagaaaaagctgtaaacccgttattt
gatttaattgctgggccaggaagacaatcaggaccagttgttgttagtgtagcaattaaa
gatacagcacaattcagtgcgtatttaagagaccctcaggtgcgagcattattgcctgta
gagcagcgatatgctaagttcgtttggggaaaacaagtaaaagacgttccattcttagat
ctatatgcattaaaaggaaatagagataatgtagcagaactaagtgggggagtaattact
gatgcaagacaggagtataatcaggttggacaggtaactgtaaccatgcagatggatggt
aaaggagctaagaaatgggaagaaatgacgggtagagcctttagtcaaagaagccagata
gcaattgtacttgatgatgtagtatattcagcaccaggagtaacaagtggccctattggt
ggaggaagaagtgaaattaccggagactttgatattacagaagggcaagatttagcaaac
gtattgagagcaggaaaactgcctgcttctgcagatattatccaaagtgaagttgttgga
ccatctttaggtcaggaagcaattgacagtggaattatgtcttttataattgctttagtg
ttgattctgatatggatgattttctattatggaaaagcaggagcttttgcagatgttgct
ttggtggtaaatatcttatttatattcggagtattagcagggttaaaagcagtgttgaca
ttacctggtattgccggtattgtattgacaattggtatgtcggttgatgcgaatgtgctt
atttttgaaagaattcgagaagaacttacaaaagggaaatctcagaaagaagcgataaaa
gacggatttagtaatgcattgtcttctattttagatgctaatattactacaggattaaca
gggcttatcttattagtatttggaacaggacctattaaagggtttgctaccactttattg
attggtattgctacatctttatttactgcaatatttattacgagattgtttattgatgga
tatggtaaaaatggaaaagaattagctttttctaccagtatgacaaaaaatctgttcaag
aatgtaaacatcgattttatagtaaaaagaaaagtggcgtatattttctctgctatcatt
gttttagcaggattagggtctttgtttacgcagggattagatcagggagtagatttcgta
ggaggaagaacatatactgtacgttttgctaaggatgttgttcctacagaagtagaaaaa
gacttgatagctgttttcgaaagtgctcaggcaaaaacattaggggcagataaccagtta
aaaataacaactaagtacaaggttaatgaaactggagaagaagtagatagcgaaatctct
aacaagttatttagtgcattaaaaccatatttgacagaaggattgagttatgaagaattc
tcaaatggagatgaagataaacaagttggaattatgtcatctatgaaggtaggacctact
atcgcagatgatattaagcaagctgcgttttggtctgtattagggtctttgatagtggta
tttttatatatcctacttagatttagaagatggcagtttagtttaggtgctgttactgct
gtattccatgatgtattagttgtattgggagtattctctttgacatggaaatttatgcct
ttcaatatggaaattgatcaggcgtttattgcggcaattctgacagtgatcggatactct
ctgaatgataccgtggttgtattcgatagaatccgagaatttttaggagaacatacagga
tggccattgagaaaaacagtgaatgctgcattgaatagtacattgagccgtaccttgaat
acttcactaacaactttattagtattggtgacgatatttatttttgcagttccgttgaga
ggattcatgttctctctgattatcggggtgttggtaggtacgtattcttcattatttatt
gctactcctgtaatgtttgatacggtgagtaaagtaggtttaaaagagaaagaagaaaaa
ccaaaagaagatttagtagaagcataa
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