Aquimarina sp. TRL1: HN014_12030
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Entry
HN014_12030 CDS
T10158
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
aqr Aquimarina sp. TRL1
Pathway
aqr00541
Biosynthesis of various nucleotide sugars
aqr01100
Metabolic pathways
aqr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
aqr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HN014_12030 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aqr01005
]
HN014_12030 (kdsA)
Enzymes [BR:
aqr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HN014_12030 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
aqr01005
]
Lipid A
HN014_12030 (kdsA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
NeuB
Motif
Other DBs
NCBI-ProteinID:
QKX05613
UniProt:
A0A7H8PMG8
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Position
complement(2997488..2998306)
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AA seq
272 aa
AA seq
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MDLKNIPNLKNLDSNNFFLLAGPCAIEGEEMALKIAEKVVEITSKLKIPYVFKGSFKKAN
RSRIDSFTGIGNEKALKILRKVGETFQIPTVTDIHENEDAVIAAEYVDILQIPAFLVRQT
DLVVAAAKTGKTVNLKKGQFMSPEAMQHAVKKVEDSGNTNAMITDRGTMFGYQDMIVDFR
GIPTMKSFGTTVLDVTHSLQQPNQSSGVTGGRPDMIETIARAGIATGVDGLFMETHFDPA
NAKSDGANMLHLDHLEKLLYNLVQIRQTINSL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaaaacattccaaatttaaaaaatctggattctaataacttcttccttctt
gcaggaccttgtgctatcgaaggggaagaaatggcattaaaaattgccgaaaaagtagtc
gaaatcacttccaaacttaagataccttatgtattcaaagggtctttcaaaaaggcaaat
cgcagcagaattgatagctttaccggtattggaaatgaaaaagccttaaaaatccttcga
aaagtaggtgaaacttttcaaattccaacggtaaccgatattcatgaaaatgaagatgct
gtaatcgctgcggaatatgttgatatcttacagatccctgcttttctagttcgccaaacc
gaccttgtggtagccgctgctaaaaccggtaaaacagtaaacctaaaaaaagggcagttc
atgagtcctgaagcaatgcagcatgctgtaaaaaaagttgaagatagcgggaataccaat
gccatgattactgatcggggaacaatgtttgggtatcaggatatgattgttgatttcaga
ggaattcctactatgaaatcatttggtactactgtattagatgtaacacattctttacaa
caacctaaccaatcaagtggtgttacaggaggaagacctgacatgatcgaaactattgcc
agagccgggattgctactggagttgacggtctctttatggaaactcacttcgaccctgcc
aatgccaaaagtgatggagcaaatatgcttcacttagatcacctggaaaaactactttat
aacctcgtacaaattcgacaaactattaattcactataa
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