KEGG   Aquimarina sp. TRL1: HN014_16470
Entry
HN014_16470       CDS       T10158                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
aqr  Aquimarina sp. TRL1
Brite
KEGG Orthology (KO) [BR:aqr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqr03032]
    HN014_16470
   03036 Chromosome and associated proteins [BR:aqr03036]
    HN014_16470
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:aqr02048]
    HN014_16470
Enzymes [BR:aqr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HN014_16470
DNA replication proteins [BR:aqr03032]
 Prokaryotic type
  DNA Topoisomerases
   HN014_16470
Chromosome and associated proteins [BR:aqr03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HN014_16470
Prokaryotic defense system [BR:aqr02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    HN014_16470
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c DNA_gyraseB_C HATPase_c_3 FBPase_3
Other DBs
NCBI-ProteinID: QKX06438
LinkDB
Position
4018759..4020618
AA seq 619 aa
MSQKSKYTEDNIRSLDWKEHIRMRPGMYIGKLGDGSSADDGIYILIKEVLDNSIDEYVMG
AGKIIEISIQGTKVIVRDYGRGIPLGKVVDVVSKMNTGGKYDSRAFKKSVGLNGVGTKAV
NALSTYFRVESTRDGKSASAEFEKGNLTNQESLDETSRRRGTKVSFVPDETIFKNFKFRL
EYVAKMLKNYVYLNPGLTIVFNGERYFSENGLKDLLSESIKEEDRLYDIIHLKGDDIEVA
LTHSKTQYSEEYHSFVNGQNTTQGGTHQAAFREAVVKTIREFYGKNYEASDIRKSIVSAI
SIKVMEPVFESQTKTKLGSTEMGGDLPTVRTYINDFVKRDLDNFLHKNQETSEKLQRKIL
QAERERKELSGIRKLAKDRAKKASLHNKKLRDCRIHLSDSKKERNLESTLFITEGDSASG
SITKSRDVNTQAVFSLRGKPLNSYNMTKKIVYENEEFNLLQAALNIEESMEDLRYNNIVI
ATDADVDGMHIRLLLITFFLQFFPELIKEGHLYILQTPLFRVRNKKETIYCYSERERIAA
INKLSGKPEITRFKGLGEISPDEFVHFIGDDIRLDPVMLDQDKSIEELLSFYMGKNTPQR
QEFIIDNLKVELDTPEDEA
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgagtcaaaaaagtaagtatacagaggataatatacgatccctggattggaaagagcat
attcgaatgcgtcccgggatgtatataggaaagttgggagatggttcatcggcagacgat
gggatttatattttgatcaaggaagtactggataactctatcgatgaatatgtgatggga
gccggtaaaataattgaaatatccatacaaggtaccaaagtgattgtcagagactacgga
cgtggaattccattaggaaaagttgtcgatgtggtatcaaagatgaataccggaggaaaa
tacgattccagagcatttaaaaaatcggtaggactaaacggagtcggtaccaaagcagta
aatgcattatccacctattttagagtagaatcaaccagggatggaaaatcagcttcggca
gaattcgaaaaaggaaacctgacgaatcaggagagcctggacgaaacttccagaaggaga
ggaaccaaagtatcttttgttcctgatgaaacgatttttaagaacttcaagttcaggtta
gagtatgtagcaaaaatgctgaaaaactacgtatacctgaatccggggttgaccattgtc
tttaatggagaaaggtatttttcggaaaatggattaaaggatttattatcagaaagtatc
aaggaagaagacagactgtatgatattattcacctcaaaggagatgatatagaggttgcc
ctaacgcatagtaagactcagtatagcgaggagtaccactcttttgtcaatgggcaaaac
accacccagggaggaacccatcaggcagcatttagagaggcagtagtaaaaacaattcgc
gaattttatggaaagaattacgaggcgagtgatataagaaaatcaatagtttctgcgatc
agcattaaggtgatggagcccgtttttgaaagtcagacaaaaacaaaattagggtctacg
gagatgggaggagacttacctaccgtgcgtacgtatatcaatgattttgtaaaaagagat
ctcgataatttcttacataaaaatcaggagacttcagaaaaactacagcgcaaaatacta
caagcagaaagagagcgaaaagagctttcgggaattcggaaactagcgaaagacagagct
aaaaaagcaagcttacacaataaaaaactaagagactgtagaattcacctttcggatagt
aaaaaagaaagaaacctggagagtaccttgtttattacggagggagattcggcgagtggt
tccattacgaaatcaagagatgtaaatacgcaggcggtttttagtcttagagggaaacct
ttgaatagttataatatgactaaaaagattgtatatgaaaatgaagaatttaatctgctt
caggcggcgctcaatatcgaagaatcaatggaagatttgcgatataacaatattgtgatc
gctaccgatgccgatgtcgacggaatgcatatacgcttattattgataactttctttttg
cagttttttccggagctgatcaaagaaggacatctgtatatattgcaaacaccacttttt
agggtacgaaataaaaaagaaacgatttattgctattccgagagagagcgtattgcagcg
atcaataaactatccggaaaacctgaaataacacgatttaaaggacttggggaaatctct
cctgatgaatttgtacattttatcggagatgatatacgattagatcctgtaatgttggat
caagataagtcaatagaagagttattgtcgttctatatgggtaagaatacaccacagcga
caagagtttatcattgataatctaaaagtggaattagataccccggaagatgaagcataa

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