Aquimarina sp. TRL1: HN014_18580
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Entry
HN014_18580 CDS
T10158
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aqr Aquimarina sp. TRL1
Pathway
aqr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HN014_18580 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqr03019
]
HN014_18580 (recQ)
03400 DNA repair and recombination proteins [BR:
aqr03400
]
HN014_18580 (recQ)
Enzymes [BR:
aqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HN014_18580 (recQ)
Messenger RNA biogenesis [BR:
aqr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HN014_18580 (recQ)
DNA repair and recombination proteins [BR:
aqr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HN014_18580 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Helicase_Sgs1
HTH_23
ADAMTSL1
zf-CXXC
HEM4
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
QKX06837
UniProt:
A0A7H8PQE9
LinkDB
All DBs
Position
4511767..4513875
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AA seq
702 aa
AA seq
DB search
MQDTKKIAATLKEYFGYDTFRPLQEKIVASVLNGHDNLVIMPTGGGKSICYQLPALLLEG
ITLVISPLIALMKDQVDGLNANGIPASFFNSSQTVEEQQELFGQLAEGAIKILYLAPESL
SLFEGALSTLSISLIAIDEAHCISSWGHDFRPAYTRLGYLKERFPSTPMIALTATADKAT
RKDICDQLRIPEATVHLASFDRENLSLEVRAGTKRIEQIIRFLNQHPEESGIIYCLSRKT
TEAIADRLTSTGFSVAAYHAGLAHDQRSKIQEQFINDTIQIVCATIAFGMGIDKSNVRWV
IHYNLPKNIESYYQEIGRAGRDGLPSTTLLFHSYSDVIQLQKFADQSGNKEVQLAKLERM
KQYADALSCRRKILLSYFGEIIEEDCGNCDVCKNPPQFIDGTIIAQKALSTIYRVKEQEP
IGTIIDIMRGAQNASVYDKNYQQLKTYGIARDISWKDWQQYLIQLINQGYIEIAFDQHNK
LRLTARSRKVLFEKETVLLAHLQELEKAKEKLPVAPLQTARTLFEKLRQLRLSLAKEAGI
PAYQIFNDATLKEMEKEKPTTDEMFMQINGVGKQKMKDYGYVFIKEIRNFVNEKPVKKKT
SKNKGNTHKVTLEAYERGLSIAEIAIERQLAEATIMSHLLKLHEEGASIDLHQFIDKNDL
EAIKKAKETLNTPDGLKVYYEYFEEAISYNHIKIGLAILNKE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacaaaaaaaatagccgctactctcaaagagtattttggatacgacacattc
agacccttacaggaaaaaatcgtagcctctgtattaaatggacatgataacctggttatt
atgccgactggtgggggaaaatcaatatgttatcaacttcccgctttattattagaggga
ataacattagtcatttccccactaattgcattaatgaaagatcaagtagacggtctgaat
gcaaatgggattcccgcttctttttttaacagtagtcaaacagttgaagaacaacaggaa
ctcttcggacaactggcagagggcgctataaaaattctttatctggcacctgagagccta
tcgttatttgaaggagcactatctacactctctattagtttaatcgctattgatgaagcg
cattgtatctcttcatgggggcatgattttcgacctgcatatacccgactcgggtatcta
aaagaacgcttcccttctactcctatgattgcgcttaccgcaaccgcagataaagctacc
cgaaaagatatatgtgatcaattacgcattcctgaggctacagtacacctggcttcgttc
gatagagaaaatctaagcctggaagtacgagccggaaccaaaagaatcgaacagatcatt
cgttttctgaatcaacatcctgaagagagtggtatcatttattgtttaagtagaaaaacc
acagaagccatcgctgatcgtctgacaagtactggtttttctgttgctgcatatcatgct
ggtttagcccatgatcaacgttcaaagatccaagaacagtttatcaatgatactattcag
attgtttgtgccaccattgcttttggaatggggatagataaatcaaatgtacgatgggtt
attcactataacttaccgaaaaacatagaaagttattatcaggaaatcggaagagccgga
agagacggacttccctctaccaccctcttgtttcatagctactcagatgtcattcagctc
caaaaattcgcagatcaatcaggtaataaagaggtacaactggccaaactggagcgaatg
aagcaatatgcagatgcgctgagctgccgaagaaaaatattattgagttattttggagaa
attatagaagaagactgtggcaactgtgatgtatgtaagaacccaccgcaatttatagat
ggaaccattatcgctcaaaaagccctttctaccatatatcgggtcaaagaacaagagcct
attggtacgataatagatattatgaggggagcgcaaaatgcttcagtatatgataaaaat
tatcagcaactaaaaacctatggaattgccagggatatttcttggaaagactggcaacaa
taccttatacaattgattaatcaagggtatatagaaatagcttttgaccagcataataaa
ttaaggctaacagcgcgatcccgtaaagtactattcgagaaagaaacagtactgctagcg
catctccaagaactggaaaaagcaaaagaaaaactcccggttgctcctctgcaaacagct
cgtactttattcgaaaaactacgtcaattacgactatcacttgccaaagaagcaggcatt
ccagcctaccaaatctttaatgatgctacgcttaaagaaatggaaaaagaaaaaccaacc
actgatgaaatgtttatgcagatcaacggtgtcggtaaacaaaaaatgaaagattatgga
tatgtctttattaaggagatcaggaattttgtaaatgaaaagcctgtaaaaaagaagaca
tcaaaaaacaagggaaatacccataaggttactttagaagcatatgaaagagggctttcc
atagcagaaattgctatagaaagacaattagccgaagctactattatgtctcacttatta
aaactccatgaagaaggagcctcaatagatcttcatcaatttatagacaaaaatgacctc
gaagcgatcaaaaaggcaaaagaaaccttaaatacccctgatggtctaaaagtctattat
gaatactttgaagaggcgattagttataatcacatcaaaataggattagcaattctaaac
aaagaataa
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