Aquimarina sp. TRL1: HN014_19250
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Entry
HN014_19250 CDS
T10158
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aqr Aquimarina sp. TRL1
Pathway
aqr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HN014_19250 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqr03400
]
HN014_19250 (priA)
Enzymes [BR:
aqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HN014_19250 (priA)
DNA repair and recombination proteins [BR:
aqr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HN014_19250 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
nSTAND3
TrmB
AAA_30
FOXO_KIX_bdg
ATPase_2
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QKX06963
LinkDB
All DBs
Position
complement(4667446..4669899)
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AA seq
817 aa
AA seq
DB search
MSYFIDVILPIPLQKSFTYQINKEEAVFLQPGMRVAVQFGKTKVYAALVERVHREAPVVY
EAKDIEHILDEEPIVTTEQLALWDWIAAYYMCAKGEVMRAALPSAFLLESETIVHKKENS
EIIETTLKDDEFLVFEALQYQSVLRIHEIAKIVGKKTVLPLIKRLLEKEVITVEEEIYEQ
YKPKIVRCVSIHEQYQEETALQELLTSLTRAPKQKEVLMHVFMLQSKSQKEIRVSDLIKI
SGTSTAVVNSLIAKEILVVYELQSDRIQYNGGEAATSKKLNEFQEKALAEIKYVFEEKDV
CLLHGVTSSGKTEIYVKLIEATLAQNKQVLYLLPEIALTTQLIVRLQAYFGERLTVYHSK
YSVNERVEAWNNVKANKEKAQIVIGARSSIFLPFTDLGLVIVDEEHEGSFKQYDPAPRYH
ARDTAIVLSKLFRGKVLLGSATPAIESYFNARNGKYGLVELMRRHGNVLMPEINLVDLKT
KYKRKEVTGHFSDTLLQSIREALKEEEQVILFQNRRGYSPVVECNTCGHAPQCTNCDVSL
TYHERKNQLRCHYCGYAIAMLHKCMACGSTELSTKGFGTEQIEKELKELFPDKNIGRMDQ
DTTRGKHGYEKIITKFENGDIDILVGTQMLSKGLDFRNVTLVGVMNADNLLNFPDFRAHE
RSYQLIQQVAGRAGRTQKRGKVLIQTYNPYHQILQQVTVNDYLAMFKDQIEERKQYKYPP
FYRLIKFTGKHKDYNRVDEAVNWLATSFRNVFKQHVLGPEFPPVSRIRNQYHKNILIKIP
QGQSLDKTKEVLGKILTSFSSIKEFSGVRILINVDNY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtattttatagatgtaattcttccaattcctcttcaaaaatcgtttacgtatcaa
attaataaagaagaagcagtttttttgcaaccaggaatgcgtgttgctgtgcagtttgga
aaaacaaaagtgtatgcagccttggtggaaagggttcatagagaagcaccagtggtatat
gaagcaaaagatatcgaacatatcctggatgaagaaccgattgttacaactgagcaatta
gcattatgggattggattgctgcgtattatatgtgtgctaagggagaagtaatgagagct
gcattgccaagcgcctttttgttggaaagtgaaacaatagttcataaaaaagaaaattct
gaaatcatagaaactacactaaaggatgatgagtttttagtatttgaagccctgcaatac
caaagtgttttaagaattcatgaaatagctaagatcgtaggaaagaaaacagttttgcca
cttataaagcgactgctagagaaagaggttataactgtagaagaagaaatttacgaacaa
tacaaaccaaaaatagtacgttgtgtttcgattcatgagcagtatcaagaagaaactgca
ttacaagaattattaacctcactcaccagagctcccaagcaaaaggaggtattaatgcat
gttttcatgctacagtcaaaatcccaaaaagaaattagagtttctgatttgatcaaaatt
tcaggaaccagtactgcagttgtaaactctttaatagctaaagagatcttagtagtatat
gagttgcaatccgatcggatacagtataatggaggagaggcagcaacaagtaaaaaacta
aatgaatttcaagaaaaagcgttggcagaaataaaatatgtttttgaagaaaaagatgtt
tgtctgcttcatggggtaacatcttcaggaaaaacagagatttatgtaaaattaatagaa
gcaacgcttgcacaaaacaaacaagtgctgtacttgctaccggagattgcactgacgaca
cagttgattgtcagattgcaagcctattttggggagcggttaacagtctatcattctaag
tattctgttaatgaacgggtggaagcctggaataatgtaaaagcaaataaggagaaagct
caaatcgttataggagcacggtcctcaatttttcttccgtttacagatttagggttggtc
attgtagatgaagaacacgaaggaagttttaagcagtatgaccctgcacccagatatcat
gctagagatactgctattgtattgtctaaattgttcagagggaaagtcttgttaggatct
gcgacccctgcaatagaaagctatttcaatgcccgtaatgggaaatatggtttggtagag
ctaatgagaagacatgggaatgtattgatgccggaaattaatttggtggatttaaaaaca
aaatacaaaagaaaagaagtaacaggtcattttagtgataccttattgcaaagcatacgc
gaagctttgaaggaagaagaacaggtaattttatttcagaacagaagagggtactctcct
gtggtagaatgtaatacatgtgggcatgctcctcagtgtacaaactgcgatgtgagtttg
acatatcacgaaagaaaaaaccaattgagatgccattattgtggatatgctatagctatg
ttgcataagtgtatggcatgcggaagtacagaattgtcaaccaaggggtttggaactgag
caaatagaaaaggaattaaaagaactctttccggataaaaatatcggacggatggatcag
gatacaacccggggtaaacacgggtatgaaaaaattattaccaagttcgagaatggtgat
attgatattctggtaggaacccaaatgttatccaagggattagactttagaaatgttaca
ctggtaggtgtgatgaatgcagataatctgttgaattttccagactttagagcgcatgaa
cgcagttatcaattaattcagcaagttgctgggagggctggtagaacgcagaaacgagga
aaagtactgatacaaacgtataatccatatcatcagatattgcaacaagttactgtaaat
gattatttagcaatgtttaaagatcagatagaagaaagaaaacagtataaataccctcct
ttctatagattgattaaatttacaggaaagcacaaggattataatagagttgatgaggct
gtaaactggctggctacatcatttcgcaatgtttttaagcagcatgtgttgggaccagaa
ttccctccggtatcaagaataagaaaccaatatcataaaaacatattgattaaaatacct
cagggacaatcgcttgataaaactaaagaagtattaggtaaaatattgacctcttttagt
agtataaaagaattctcaggggttagaattctcattaatgtagataattattaa
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