Aquitalea sp. USM4: DKK66_00700
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Entry
DKK66_00700 CDS
T05865
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DKK66_00700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqs03400
]
DKK66_00700
DNA repair and recombination proteins [BR:
aqs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DKK66_00700
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DKK66_00700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Microtub_bd
HH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
QBJ76789
LinkDB
All DBs
Position
complement(151751..153763)
Genome browser
AA seq
670 aa
AA seq
DB search
MLLTFPDSPFRLHQPFPPAGDQPTAIAQLVEGLEDGLSYQTLLGVTGSGKTFTMANVIAR
TGRPAIIMAHNKTLAAQLYSEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NEHIEQMRLSATKSILERPDCIIVATVSAIYGIGDPSDYHQMILHLKEGETTPQRSIISR
LTTMQYDRNDVDFGRGTFRVRGDVIDIFPAESSDTALRVSLFDDEVETLTLFDPLTGVTK
QRVGRYTVFPSSHYVTPRDTVLKACEKIKLELAERIEWYQKEGKLVEAQRIEQRTRFDLE
MLYEMGFCKGIENYSRHFSGRAPGDAPPTLIDYLPKNALMFIDESHVTVPQVGAMYKGDA
ARKSNLVDYGFRLPSAVDNRPLKFHEFEKLMPQTVFVSATPAAYEKEHAGQVVEQVVRPT
GLVDPVIEIRPVATQVDDLLSEIRLRMDLGERVLVTTLTKRMAEQLADYYTEHGVKVRYL
HSDIDTVERVEIIRDLRLGMFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSDRSLI
QTIGRAARNLNGKALLYADRITDSMRRAMDETERRRAKQLAFNTEHGIVPQGINKKIKDI
IDGVYSVEDQRKKLVDEAQVAMMDEKTLAREIKRLEKEMMEAARNLEFEKAARLRDELKA
LKERMFISDL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttacctttccggatagtcccttccgtttgcaccagcccttcccgcctgctggc
gaccagcccaccgccattgcccagctggtggagggcctggaagacggcttgtcctatcaa
accctgctgggggtcaccggttcgggcaaaaccttcaccatggccaatgtcattgcccgc
accggcaggccggccatcatcatggcgcacaacaagacgctggcggcgcagctgtacagc
gaaatgcgcgagtttttcccggaaaatgcagtcgagtattttgtttcctactacgactac
taccagccggaggcttacgttcccagccgcgacctgttcattgaaaaggattccagcatc
aatgaacacatcgaacagatgcgcctgtccgccaccaaatccattctggagcggccggac
tgcatcatcgtggctaccgtgtcggccatttacggtattggcgatccatccgactaccac
cagatgatcctgcatctgaaggaaggggaaaccactccgcagcgcagcatcatcagccgc
ctcaccaccatgcagtacgatcgcaacgatgtggatttcggccgtggtactttccgggtg
cgtggcgatgtaatcgacatcttcccggcagaaagcagcgataccgccttgcgcgtcagc
ctgtttgacgatgaggtggaaacgcttaccctgttcgatccgttgacaggcgtcaccaaa
cagcgggttggccgctataccgtgttcccgtccagccactatgtgacgccgcgcgacacc
gtgctcaaggcctgcgagaaaatcaagctggaattggccgagcgtatcgagtggtaccag
aaggaaggcaagctggtggaggcgcagcgcattgagcagcgcacccgcttcgatctggaa
atgctgtacgagatgggcttttgcaagggcatcgaaaactactcgcgccacttttccggt
cgtgcgccgggcgatgcgccaccgacgctgattgactacctgcccaagaatgcgctgatg
ttcattgacgaatcccatgtcaccgtgccgcaggtgggggcgatgtacaagggcgatgcc
gcgcgcaagagcaatctggtggattatggtttccgcctgccgtccgccgtggacaaccgg
ccgctgaaattccacgaattcgaaaagctgatgccgcagacggtgtttgtgtctgccaca
ccggctgcctacgaaaaagaacatgccgggcaggtggtggagcaggtggtgcgtcctacc
ggtctggtggacccggtgattgaaatccgtccggtagccacccaggtggatgacttgctg
tcggaaatccgcctgcgcatggacctgggcgaacgggtgctggtaaccacgctcaccaag
cgcatggccgaacagctggccgactattacaccgagcacggcgtgaaggtacgttacctg
catagtgatatcgacaccgtggagcgggtggaaatcatccgcgacctgcgcctgggcatg
ttcgacgtgctgatcggcatcaacctgctgcgcgaggggctggatatccccgaggtcagc
ctggtggccattctggatgccgacaaggaaggcttcctgcgctcggaccgctcgctgatc
cagaccataggccgcgccgcgcgtaacctcaacggcaaggccttgctgtacgcagaccgc
attaccgattccatgcgtcgcgcgatggatgaaaccgaacggcgccgcgccaagcagctg
gccttcaataccgagcatggcattgtgccgcagggtatcaacaagaagatcaaggacatc
atcgacggcgtgtacagcgtggaagaccagcgcaagaaactggtggatgaagcgcaagtg
gcgatgatggacgagaagacgctggccagggaaatcaagcgtctggagaaggaaatgatg
gaagcggcgcgcaatctggagttcgaaaaagccgcccgcctgcgcgacgagttgaaggcg
ctgaaggaaaggatgttcatcagcgatctgtaa
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integrated database retrieval system
