Aquitalea sp. USM4: DKK66_03535 Help Entry DKK66_03535       CDS       T05865                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism aqs  Aquitalea sp. USM4 Pathway aqs02020   Two-component system aqs02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:aqs00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     DKK66_03535  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     DKK66_03535  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aqs03021]     DKK66_03535 Transcription machinery [BR:aqs03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      DKK66_03535 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_23 HTH_38 Motif Other DBs NCBI-ProteinID:  QBJ77257 LinkDB All DBs Position 765581..767005 Genome browser AA seq 474 aa AA seqDB search MKQSLQLRVSQQLTLTPQLQQSIKLLQLSTLDLQAEVERFLLDNPMLERGDEPPSHDSSP AETPAAQEESTSTASDSSDGDNSQDASNGELTDWGSGSRRNDGDDEFDPMLNVPCPVSLR EHLLAQLGELTLPTRDQAIVQLLIEELDDNGFLTTDLEELASNLPLELELETDELMVGLR LLQQFDPPGIAARNLAESLGLQLARLPANEPGHALARQIVAEHLTLLGNRDYTRLKRILG VDDEAIREAQQLIARLTPHPASGFGGEDVHYVIPDVTVRKRRGHWVAELNNGAVPRLRVN QLYAQMLSENRAGAGELTGRLQEAKWLVKNIQQRFDTILKVSEAIVERQQAFFEHGEVAM RPLILRDIADELGLHESTVSRVTTQKYLLCPRGLFELKYFFGSALETDSGGECSATAIKA HIRRMIDGENPAKPLSDSAIADELGKQGIQVARRTVAKYREAMQIPPVNLRKAL NT seq 1425 nt NT seq  +upstreamnt  +downstreamnt atgaaacagtcactacagctgcgggtctcccagcaactcaccctcacgccgcaactgcaa cagtccatcaaactgttgcagctgtccacgctcgacctgcaggcagaagtcgaacgcttc ttgctggacaaccccatgctggaacgcggcgatgagccgccctcgcatgacagcagcccg gcagaaacgccggctgcccaggaagaatccaccagcacggcgtcggacagcagcgatggt gacaacagccaggacgccagcaatggcgaactcaccgactggggcagtggcagccgccgc aacgacggggacgatgaattcgaccccatgctcaacgtaccctgcccggtcagcctgcgc gaacacctgctggcgcagctgggtgaactgaccctgcccacccgcgatcaggccattgtc cagctgttgatcgaagaactggacgacaacggtttcctgactaccgatctggaagaactg gccagtaatctgccgctggaactggaactggaaaccgatgaactgatggtcgggctgcgc ctgttacagcaattcgaccctcccggcattgccgcgcgcaacctggccgagtcgcttggc ctgcaactggcccgtttgcccgccaacgagcccggccatgcactggcacgccagattgtg gccgagcacctgacgctgctgggcaaccgcgactacacccgcctgaagcgcattctgggc gtggatgacgaagccatccgcgaggcacagcaactgatcgcccggctgacccctcacccg gcgtccggtttcggcggcgaagacgtgcactatgtcatcccggatgtcaccgtgcgcaaa cggcgtggtcactgggtggctgaactcaataacggtgcggtaccgcgcttgcgcgtcaac cagctgtatgcccagatgctgtcggaaaaccgcgctggcgcaggcgaactgactggccgg ctgcaagaagccaaatggctggtcaagaacatccagcaacgatttgacaccattctgaaa gtgtcagaagctatagtcgaaagacagcaagcgttctttgaacacggtgaagtcgccatg cggccgcttatcctgcgggacatcgcagacgaacttggcctgcatgaatcgaccgtatca cgcgtcaccacgcagaaatacctgctttgccctcgtggtctgttcgagctgaagtatttc tttggcagtgcactggaaaccgacagcggcggcgaatgctcggcaacggccatcaaggcg catatccgccgcatgatagacggtgaaaacccggccaagccactttcggacagcgccatt gccgacgaactgggaaagcaagggattcaggttgcaagacgcaccgttgcgaagtatcgt gaagctatgcagataccgccggtcaatctgcgcaaggcattgtga

DBGET integrated database retrieval system