Aquitalea sp. USM4: DKK66_03620
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Entry
DKK66_03620 CDS
T05865
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DKK66_03620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqs03400
]
DKK66_03620
Enzymes [BR:
aqs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DKK66_03620
DNA repair and recombination proteins [BR:
aqs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DKK66_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2000
DHQ_synthase
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
QBJ77274
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All DBs
Position
781366..782721
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AA seq
451 aa
AA seq
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MNFNSTANDVISVSSLNRMVRDLLESGLPPLWIGGEISNLTLAASGHAYFSLKDGGAQIR
CVMFRHKLSLLPFRLAEGMQVELKGLVTLYEARGDYQINVDTMRSAGLGRLYEAFEKLKS
RLSAEGLFDAARKRPLPAHPAAIGIVTSPAAAALRDVVTTLARRMPDIPVILYPAQVQGE
SAARQIAAAIEQASARQEVEVLIVCRGGGSIEDLWSFNEEIVARAIAACRIPVVSGVGHE
TDFTICDFVADRRAPTPTAAAELVSPSQEQLRLQLEQAKRGLERALGRLLVDKSQQLDYL
SRRLNHPGEILRRQVQSLQQASVRLRRSLDGVFDRRRFGLQLANSRLQRHQPQLLRQQHQ
LNQLQGSLQRGMQLLISRRKQMLQQQAATLEAMNPQAVLNRGYAIVQKQDGHAVKSPQEL
LNRERVLLRLADGVTEALVDHPTGAQPELPF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaatagcacggccaatgacgtcatcagcgtctcttcccttaatcgcatggtg
cgtgacttgctggagtccggcctgccaccgttgtggattggcggagaaatttccaacctg
accctggctgcgtctggtcatgcctatttctccctcaaggatggcggcgcacaaatacgc
tgcgtgatgttccgccacaaactgtccttgctgccgtttcgtctggcagaaggcatgcaa
gtggaactcaagggcctggtcaccctgtacgaggcccgcggcgattaccagatcaatgtt
gacaccatgcgctctgcggggcttggccgcctgtacgaggccttcgaaaagctgaaaagc
cgcttgagtgctgaaggcttgtttgatgcagcacgcaaacgtccgctgccagcacaccct
gcagccatcggcattgtcacctcaccggctgcggcggcgctgcgcgatgtggtcaccacg
ctggcccggcgcatgccggacatcccggtcattctttaccctgcgcaggtgcaaggggaa
agcgctgcgcgacagattgcagccgccatcgagcaagcctcggcacggcaggaagtagaa
gtgctgattgtctgtcgcggcggtggcagcattgaagacttgtggtcgttcaacgaagag
attgttgcgcgtgccattgccgcctgccggattccggtggtcagcggtgtcggccacgaa
accgacttcaccatttgcgattttgttgctgaccgccgcgcccctacgccgactgcggca
gcagaactggtttcccccagccaggagcaactgcgcctgcaactggagcaagccaaacgc
gggctggagcgagcactgggtcggttgctcgtggataaatcacagcaactggactacctg
tcccgccggctgaatcacccaggagaaatactgcgacggcaagtgcaaagcctgcagcag
gcatccgtgcgtttacgtcgtagcctggatggcgtatttgaccgtcgccgctttggcttg
cagctggcaaacagccgcctgcagcggcatcagccacagttgctgcgccagcaacatcag
ctgaaccagttgcagggaagcttgcagcgcggcatgcaactgcttatcagccgccgcaaa
cagatgctgcaacaacaggcagccacgctcgaagccatgaatccgcaggcagtactcaac
cgtggttatgccatcgtgcaaaagcaggatggtcatgcggtgaagtcgccacaggaattg
ctgaaccgcgagcgcgtgctgttgcgcctggccgatggcgtcaccgaagcgctggtcgat
caccccactggcgcgcaaccggaattgcccttctga
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