Aquitalea sp. USM4: DKK66_04025
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Entry
DKK66_04025 CDS
T05865
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DKK66_04025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqs03400
]
DKK66_04025
Enzymes [BR:
aqs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKK66_04025
DNA repair and recombination proteins [BR:
aqs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DKK66_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_30
zinc-ribbons_6
DciA
ADDB_N
HypA
Motif
Other DBs
NCBI-ProteinID:
QBJ77345
UniProt:
A0A4P6TFQ7
LinkDB
All DBs
Position
complement(856411..858636)
Genome browser
AA seq
741 aa
AA seq
DB search
MAQSLVGAGFAVKGKFTVGSQRVQVVVDLPLFGAFTYLSHFDVIPGQRVAVPFGKRQLCG
VAVTGIPPEGLSDSQLKTIDQVFDGLPPLPADFLALTEFAAAYYHYPLGPTLFTALPTGL
REARDITPVDERPFGLSELGQASQPPARQRARLALWQALCDGPLTQAQARLVTPQAGKIL
ADWLAEGLVQRVTAEKPALQLGSAPQLNADQQAALDALLAQPGGFQPWLLHGITGSGKTE
VYLQRIAHSLAAGQQVLVLVPEINLTPQLVERFIQRFPATRIAVQHSQLAEGERLRNWLD
AWQGRADIVIGTRLSVFTPMPRLGLIVVDEEHDGSFKQQDGLRYHARDLAIWRAHRAGLP
IILGSATPSLETVANVEAGRYRQLKLSQRAHGAARLPQVRLVDTRRAKLTEGLSDPVIKA
LAARLERREMSLVFINRRGFAPVLACSDCGWTSGCPRCSTRLVLHLLERKLRCHHCGWEE
AVPHACPECGAPDIKPLGEGTQRLESALGRLFPTARILRIDRDTTQRKQAWEEIYRQVHA
GEVDMLVGTQMLAKGHDFGTLSLVTVLNADGGLYSADYRASERLFAQLTQVAGRAGRADA
PGEVLVQTQWPDHPLYQALVAHDFDGFAASLLQERRQAAFPPSVHQALLRADATELAQAT
AFLTQVRSQVQNLAAGVLISGPAPALMVRLANRERAQLVLECANRQQLHQFLDQLPPLLD
QLARQYGRGLRWSLDVDPQEM
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaagccttgtcggtgctgggtttgctgtaaagggaaaatttaccgtgggttct
cagagagttcaggtggtggttgatctgcccctgtttggcgcatttacctacctgtctcat
tttgatgtcatacccggtcaacgggtggcggttccctttggcaaaagacagctgtgtggc
gtagccgtcactggcatacccccagagggtttgtccgacagccagctcaaaaccatcgat
caggtgtttgacggcttgccgccactaccggcggatttcctggcccttaccgaatttgcc
gctgcctattaccactatccccttgggccgacgctgtttaccgccttgcccaccggcctg
cgtgaagcgcgtgatatcaccccggtcgatgaacgtccgtttggcctgagcgagctgggg
caggcaagccagcctcctgcacggcagcgggcacgcctggccttgtggcaggccttgtgc
gatggcccgcttacgcaggcacaagcccggctggtcacgccgcaggcaggcaagattctg
gcggactggctggcggaggggctggtgcagcgtgtgacggcagaaaagcctgccttgcag
ctgggcagtgcgccgcaactgaatgcagaccagcaggccgcactggatgccttgctggcg
cagcccggcggcttccagccctggctgttgcatggcatcaccggcagtggcaagaccgaa
gtgtatttgcagcgcattgcccacagcctggctgccgggcagcaagtgctggtactggtg
ccggaaatcaaccttaccccccagttggtggagcgcttcatccagcgttttcctgccacc
cgcattgcggtacagcacagccagcttgcggagggcgagcgcctgcgcaactggctggac
gcctggcaaggacgtgccgatatcgtgatcggcacccgcttgtcggtattcacccccatg
ccgcgcctggggctgatcgtggtggatgaagagcatgatggctcgttcaagcagcaggac
ggcttgcgctaccatgcacgtgatctggccatctggcgcgcgcaccgtgccggcttgccc
atcattctgggtagcgccacccccagtctggaaaccgtggccaatgtcgaagccggacgc
taccgccagctcaagctcagccagcgggcccatggtgccgccaggctgccgcaggtacgg
ttggtggatacccggcgtgccaagctgaccgaaggattgtccgatcctgtaatcaaggcc
ctggctgcccggctggagcggcgcgagatgagcctggtgttcatcaaccggcgcggtttt
gccccggtgctggcctgtagtgattgcggctggaccagtggctgcccgcgctgctccacc
cggctggtgctgcatttgctggagcgcaagctgcgctgtcaccattgcggctgggaagag
gcagtaccccacgcctgcccggagtgcggtgcgccggacatcaagccgctgggcgagggc
acgcagcggctggaatccgcactggggcgtctgttccctactgcgcgcatcctgcgcata
gaccgcgacaccacccagcgcaaacaggcctgggaagagatttaccgccaggtgcatgcc
ggtgaggtggacatgctggtcggcacccagatgctggccaagggccacgattttggcacc
ctgtcgctggtgactgtgctgaatgccgatggcggtttgtattcggctgactatcgcgct
tccgaacgcctgttcgcccagctcacccaggtggctggccgcgctggccgggccgatgcc
cccggtgaagtgctggtgcagacgcaatggccggatcacccgctgtatcaggcactggtg
gcgcacgattttgatggctttgccgccagcctgttgcaagagcgccgtcaggcagccttt
ccgccgtcggtacatcaggccctgctgcgggccgatgccaccgaactggcgcaggccacg
gcctttctcacccaggtgcgcagtcaggtacaaaaccttgccgctggcgtgctgatttcc
ggcccggccccggcgctgatggtgcggctggcgaaccgcgaacgcgcccagctggtgctg
gagtgtgccaaccgtcagcagctgcaccagtttctcgatcaattacccccgctgctggat
caactggcacgccagtatggccgcggtttgcgctggtcgctggatgtcgacccgcaggag
atgtaa
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