Aquitalea sp. USM4: DKK66_05775
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Entry
DKK66_05775 CDS
T05865
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DKK66_05775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqs03400
]
DKK66_05775
Enzymes [BR:
aqs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKK66_05775
DNA repair and recombination proteins [BR:
aqs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DKK66_05775
RecFOR pathway proteins
DKK66_05775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_22
AAA_3
Rad17
DUF815
nSTAND3
AAA_18
AAA_14
AAA_2
TsaE
NTPase_1
AAA_17
GGDEF_2
AAA_33
RNA_helicase
Bac_DnaA
NB-ARC
AAA_25
AAA_28
TniB
AAA_24
ABC_tran
IstB_IS21
NACHT
Cytidylate_kin
Zeta_toxin
SLS1_N
Motif
Other DBs
NCBI-ProteinID:
QBJ77650
UniProt:
A0A4P6TGG3
LinkDB
All DBs
Position
complement(1207578..1208612)
Genome browser
AA seq
344 aa
AA seq
DB search
MIETDKLIGGAPERRIVTQQSLSSQEEALERALRPKQLDEYVGQKKAREQLEIFIEAAKR
RGEALDHVLLFGPPGLGKTTLAHIVAREMGVNLRQTSGPVLERAGDLAALLTNLEPHDVL
FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNP
LRDRFGIVARLEFYTPEELTRIVSRSAGLLNVTLGEDGAFEVARRSRGTPRIANRLLRRV
RDYAEVKSDGVVTAQVADAALAMLDVDPAGLDVMDRKLLAAILEKFGGGPVGLDNVGAAI
GESTDTIEDVIEPFLIQQGYLQRTPRGRMATALAYTHFGLPLKD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccgacaagctgattggcggcgcacccgagcgacgcatcgttacccagcaa
agcctgtcctcgcaggaagaagcactggagcgcgcgctgcgccccaagcagctggatgaa
tatgtgggccagaagaaggcacgcgagcagctggaaatcttcatcgaggccgccaagcgc
cgtggcgaagcgctggaccacgtgctgctgtttggcccgcccggcctgggcaagaccacg
ctggcgcacattgtggcgcgcgagatgggcgtgaacctgcgccagacctccggcccggtg
ctggaacgtgcaggcgacctggccgccctgctgaccaatctggagccgcacgatgtgctg
ttcatcgacgaaatccaccgcttgagcccggttgtcgaggaaatcctctacccggcgctg
gaggattaccagatcgacatcatgattggcgaaggcccggccgcacgctcggtcaagctg
gacctgccgcccttcaccctggtgggggccaccacccgtgccggcatgctgaccaacccg
ctgcgggaccgctttggcattgtggcgcggctggagttttatactccggaagaactgaca
cggattgtcagccgttctgccgggctgctgaatgtcacactgggcgaagacggcgctttc
gaggtggcacgccgctcgcgcggcacaccgcgcattgccaaccgcctgctgcgtcgggta
cgtgactatgccgaagtgaaatccgatggcgttgtcacggcccaggtggccgatgctgca
ttggccatgctggatgtcgacccggccggtctggatgtgatggaccgcaagctgctggct
gccattctggagaaattcggtggcggcccggtggggctggacaatgtcggtgcggccatt
ggtgaatccaccgacaccattgaagacgtgatcgaacccttcctgatccagcaaggctat
ttgcaacgtaccccgcgcggccgcatggccacggctttggcgtacacccattttggcctg
ccgctgaaagactag
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