Aquitalea sp. USM4: DKK66_05960
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Entry
DKK66_05960 CDS
T05865
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
aqs
Aquitalea sp. USM4
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqs03009
]
DKK66_05960
Enzymes [BR:
aqs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DKK66_05960
Ribosome biogenesis [BR:
aqs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DKK66_05960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_12
PCMT
TilS
MTS
Motif
Other DBs
NCBI-ProteinID:
QBJ77679
LinkDB
All DBs
Position
complement(1239229..1240482)
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AA seq
417 aa
AA seq
DB search
MHRIQQLAAEVLGQVESGRTLTEALAQAQRQGADLTAQERTALQDICYGSLRQLARLRFW
LRRLVPKALPDAQLERVLQVAFYQLVYTRAADYAVVNEAVKLAERLARGKFKALVNGVLR
NFLRQREEMLRLAQKDLEAATNHPRWWVKAIQQAYPQEWSSILEWNNSHPPMTLRVNVRK
STVAAYLAQLEALGMGATALDDASGILLDKPVNVRELPGFADGVVSVQDWGAQQAARLLD
LHAGQRVLDACAAPGGKTCHMLEMADVEMTALDIDPQRLQRVAENLQRGGLHASLHAADA
GQAADWWDGKPFDRILADVPCSASGVVRRHPDIKWLRRPGDFSTLAAQQAQMVDTLWGLL
APGGKMLYATCSIFPEENQQQLTAFLARHADAECLNQQQLLPCERHDGFYYALLAKH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcatacagcaactggccgccgaagtgctgggccaggtggaatccggccgtacc
ctgaccgaggcgctggcccaggcccaacgccagggcgccgacctgactgcgcaagagcgc
acggccttgcaggacatttgctacggcagcctgcgtcaactggcacgcctgcgcttctgg
ttgcgccgcctggtgcccaaggccttgccggatgcccagctggagcgggtattgcaggtg
gctttctatcagctggtatacacccgtgcggccgattacgccgtcgtcaacgaggcagtg
aagctggcagagcggctggcccgcggcaagttcaaggcgctggtcaatggcgtgctgcgc
aacttcttgcgccagcgcgaggaaatgctgcgcctggcgcagaaagatctggaagccgcc
accaatcacccgcgctggtgggtgaaagccatccagcaggcctacccgcaagagtggtcg
tccatcctggagtggaataacagccatccgccgatgacgctgcgcgtcaacgtccgcaag
agcacggtggccgcctatctggcccagctcgaagcgctgggcatgggggcgactgcactg
gatgacgccagcggcatcctgctggacaagccggtgaatgtacgcgaactgcccggcttt
gctgacggcgtggtgtcggtacaggactggggcgcacagcaggctgcccgcctgctggac
ctgcacgccggacagcgcgtgctggatgcctgtgccgcgccgggtggcaaaacatgtcat
atgctggaaatggcagatgtggagatgaccgcgctggatatcgacccgcagcgattgcaa
cgggtggcggaaaacctgcagcgcggtggcttgcacgccagcctgcacgcggccgatgcc
gggcaggcggctgactggtgggatggcaagcccttcgatcgcattctggctgacgtgccg
tgctcggcttccggcgtcgtgcgtcgtcacccggacatcaagtggctgcgccgtccgggc
gacttttccaccctggccgcccagcaggcgcagatggttgacacgctatgggggctactc
gcgcccggcgggaaaatgctatacgctacgtgctcgatttttccggaagaaaatcagcag
cagttgactgcattcctggcgcgtcatgccgatgccgaatgcctgaatcagcagcaattg
ttgccctgtgagcgtcatgacggtttctattacgcgctgcttgcgaagcattag
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