Aquitalea sp. USM4: DKK66_06175
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Entry
DKK66_06175 CDS
T05865
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
aqs
Aquitalea sp. USM4
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqs03019
]
DKK66_06175
03009 Ribosome biogenesis [BR:
aqs03009
]
DKK66_06175
Messenger RNA biogenesis [BR:
aqs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DKK66_06175
Ribosome biogenesis [BR:
aqs03009
]
Prokaryotic type
rRNA processing factors
DKK66_06175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
QBJ77720
LinkDB
All DBs
Position
complement(1280863..1282359)
Genome browser
AA seq
498 aa
AA seq
DB search
MLHQSIPLPRDIQRPKEQILVNITPQETRVAVLEDSIVQELHVERAASRGIVGNIYLGQV
KRVLPGMQSAFIEIGLERAAFLHIADVLEQRQHPTEPQRIEKMLFEGQTVLVQVIKDPIG
TKGARLSTQISLAGRFLVHLPQEEHIGISQKIESESERHSLKARLEKLLPPSTPRGYIIR
TSAETATDTELQADIEYLSKLWADIRHKSQHLPAQSLLYEDLPLAVRVLRDMVSDTTEHV
IVDSTENYSRMVEFAEQYVQSAVRKIERYSGERPLFELFSIEAEIDKALSRRVNLKFGGY
LIIDQTEAMTTIDVNTGGFVGNRNFDETIFKTNLEATQAIARQLRLRNLGGIIIVDFIDM
DNEEHQTAVLSEVAKALARDRTRVTLNGFTSLGLVEITRKRTRESLAHVLCEPCPTCQGR
GEIKTAQTVCYEVQREIVREARQFDAKGYRILAAQPVIDMFLDEESQSLAMLVDFIGKPI
SLSVESTYTQEQFDVVLL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcagtccattccgctgccgcgcgacatccagcgccccaaggaacaaatcctc
gtcaacatcaccccgcaggaaacccgcgtggcggtgctggaggactccatcgtgcaggag
ctgcacgtggaacgcgccgccagccgcggcattgtcggcaatatctatctgggccaggtc
aagcgcgtgctgcccggcatgcagagcgctttcatcgaaattggcttggaacgcgcggct
ttcctgcacattgccgatgtactggaacagcgccagcaccccaccgaaccgcaacgcatc
gaaaaaatgctgttcgaaggccagaccgtgctggtacaggtgatcaaggacccgatcggc
accaagggtgcgcggctgtccacgcaaatctcgctggccgggcgtttcctggtgcatttg
ccgcaggaagaacacatcggcatctcgcaaaagatcgagagcgagtcggaacgccacagc
ctgaaggcgcggctggaaaagttgctgccgcccagcacgccgcgtggctacatcatccgc
accagcgcggaaaccgccactgataccgagctgcaggccgacatcgaatacctgtccaag
ctgtgggccgacatccgccacaaatcgcagcacctgccggcgcaaagcctgttgtacgaa
gacctgccgctggcggtgcgcgtgctgcgcgacatggtgagcgacaccaccgagcacgtg
attgtcgactcgaccgaaaactacagccgcatggtggaatttgccgagcaatacgtgcag
tctgccgtgcgcaagatcgagcgctattccggtgagcgcccgctgttcgagctgttttcc
atcgaggcggaaatcgacaaggcattgtcgcggcgggtgaacctgaagtttggcggttac
ctgatcatcgaccagaccgaggcgatgaccaccatcgacgtcaacaccggcggctttgtc
ggcaaccgcaatttcgacgaaaccatcttcaagaccaatctggaagccacccaggccatt
gcccgccagctgcggctgcgtaatctgggcggcatcatcattgtcgatttcatcgacatg
gacaatgaagagcaccagactgcggtattgagtgaagtggccaaggcactggcgcgcgac
cgcacccgggtcaccctcaacggctttaccagcctggggctggtggaaatcacccgcaag
cgcacccgcgagagcctggcacacgtgttgtgcgaaccctgccccacctgccagggccgt
ggtgaaatcaagaccgcccagaccgtgtgttacgaggtgcaacgcgagatcgtgcgcgag
gcacgccagttcgatgccaagggctatcgcatcctggcggcccagccggtgatcgacatg
ttcctcgacgaggaatcgcaaagcctggccatgctggtggacttcatcggcaagccgatt
tcgctgtcggtggaaagcacctatacccaggaacagtttgacgtggtcctgttgtaa
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