KEGG   Aquitalea sp. USM4: DKK66_09280
Entry
DKK66_09280       CDS       T05865                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
aqs  Aquitalea sp. USM4
Pathway
aqs03030  DNA replication
aqs03410  Base excision repair
aqs03420  Nucleotide excision repair
aqs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aqs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DKK66_09280
   03410 Base excision repair
    DKK66_09280
   03420 Nucleotide excision repair
    DKK66_09280
   03440 Homologous recombination
    DKK66_09280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqs03032]
    DKK66_09280
   03400 DNA repair and recombination proteins [BR:aqs03400]
    DKK66_09280
Enzymes [BR:aqs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DKK66_09280
DNA replication proteins [BR:aqs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DKK66_09280
DNA repair and recombination proteins [BR:aqs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DKK66_09280
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DKK66_09280
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: QBJ78262
UniProt: A0A4P6TJS7
LinkDB
Position
1970617..1973406
AA seq 929 aa
MKTLLLIDGSSYLYRAFHAMPDLRSPDGRPTGAVYGMVNMLRRLEKEVQFDYSACVFDAK
GKTFRDELYPEYKANRPSMPEELAAQIKPVHEVVQASGWPMLMVEGVEADDVIGTLAKMG
EAAGFKVIISTGDKDMAQLVTPMVSLVNTMTNENLDQAGVKEKFGVPPERIIDYLTLIGD
KVDNVPGVDKCGPKTAVKWLEEYGTLDNIIANADKVGGKVGENLRAALDWLPRGHQLITI
KCDVDLQQDMPYGLNSLQHGVKDRPRLAELFKDHGFRTFYREVTEGEDAPVSSPASVDAP
AASVGQTDDMFAMADAAPAPVAPPVSAISRHYHTILDEAALQGWLDKLNSGALVSLDTET
TSLDQMQARIVGISFALKAGEAAYLPLGHHYAGAPLQLALDEVLARLKPWLEDASKPKCG
QNLKYDRHVFANHGIQLAGVVDDSMLASYVLESHQRHNMDDLATRHLGETTVSYEDICGK
GAKQIGFGEVDIEIAANYAAEDADITLRLNQYFAPQLTDKLGKIYRDIELPVAEVLFRME
RNGVLIDRDQLAAQSHQLGTQMLQLESQAYELAGQPFNLNSPKQLQEILFGKLGIPTKGI
KKTPSGGFSTDESVLEALALDYPLPKCILQYRSLTKLKSTYTDKLPTLINPDTGRVHTNY
SQAVAITGRLASSDPNLQNIPVRTAEGRRVREAFIAKPGHSIVSADYSQIELRIMAHLSD
DEGMLAAFASGEDIHKATAAEVFGVTLEQVTSDQRRAAKAINFGLIYGMSAFGLAAQLDI
ERSAAQQYIDRYFMRYPGVADYMQRTRETAREQGYVETVFGRRLYLPEIKLSNPARRAGA
ERAAINAPMQGTAADLIKLAMIAVQHWLDAQKLSSLLIMQVHDELVLEVPDAELELVKQQ
LPQIMAGVAQLKVPLLAEVGAGSSWEAAH
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgaaaacattgttattgatcgacggctcttcttacctgtatcgcgccttccatgcgatg
cccgatttgcgttctccggatggccggcccaccggtgcggtatacggcatggtcaacatg
ctgcgccgcctggagaaagaggtgcagttcgattatagcgcctgcgttttcgacgctaaa
ggcaagactttccgcgatgagctgtatccggaatacaaggccaaccggccttccatgccg
gaagagctggccgcacagattaagccggtgcacgaggtggtgcaagcttcgggctggccg
atgctgatggtggagggggtggaagcggacgatgtcatcggtacgctggcaaagatgggc
gaggcggccggcttcaaggtcatcatctccaccggcgacaaggacatggcccaactggtg
acgcccatggtgtcgctggtgaacaccatgaccaatgaaaacctggaccaggccggggtg
aaagagaagttcggcgtgccgccggaacgcatcatcgactacctcaccctgataggcgac
aaggtggacaacgtccccggcgtggacaagtgcggccccaaaaccgccgtcaagtggctg
gaagaatacggcacgctggacaacatcatcgccaatgccgacaaggtgggcggcaaggtg
ggcgaaaacctgcgcgccgcgctggactggctgccgcgcggccatcagctgatcaccatc
aagtgcgatgtcgatttgcagcaggacatgccctacggcctcaacagcctgcagcacggc
gtgaaagaccgtccgcgcctggccgagctgttcaaggaccacggcttccgtaccttctac
cgcgaagtgaccgaaggcgaagatgcgccggtcagcagcccggcctcggtcgatgcgcct
gcggccagtgttggccagactgacgatatgtttgccatggccgatgccgcaccggcaccg
gttgccccgccagtgagcgccatctcccgccattaccacaccattctggatgaggccgca
ctgcaaggctggctggacaagctaaatagcggtgcgctggtgtcgctggacaccgaaacc
accagccttgaccagatgcaggcgcgcattgtcggcatcagcttcgccctgaaagctggt
gaggccgcctacctgccgctgggtcaccactatgccggtgcaccgctgcaactggcgctg
gatgaagtactggcccggctcaaaccctggctggaagacgccagcaagcccaaatgcggt
cagaacctgaaatacgaccgccacgtgtttgccaaccacggtatccagcttgctggggtg
gtggatgactccatgctggcctcctatgtgctggaaagccaccagcgccacaatatggac
gacctggccacacgccatctgggtgaaaccacggtcagctatgaagacatctgcggcaag
ggggccaagcagatcggttttggcgaagtggatatcgaaattgccgccaattacgcggcg
gaagatgccgacatcaccctgcggctgaaccagtactttgccccgcaactgaccgacaaa
cttggcaaaatctaccgcgacatcgaactgccggtggccgaagtgctgttccgcatggag
cgcaacggcgtgctgatcgaccgcgaccagctggcagcgcagagccatcaactgggcacg
cagatgctgcagctggaaagccaggcctatgaactggccggccagcccttcaatctgaat
tcccccaagcagctgcaggaaatcctgttcggcaagctgggcattcccaccaagggcatc
aagaaaacgccgtccggtggtttctccaccgatgaatcggtactggaagcgctggcgctg
gattacccgttgcccaagtgcatcctgcaataccgcagcctgaccaagctcaagtccacc
tataccgacaagctgcccacgctgatcaacccggacaccggccgggtgcataccaattac
tcacaggcagtagccattaccgggcgcttggccagctcggacccgaacctgcaaaatatc
ccggtacgtaccgccgaaggccgccgcgtgcgcgaggctttcatcgccaagccgggccac
agcattgtcagtgccgactattcgcagattgaactgcgcatcatggcgcacttgtccgac
gacgaaggcatgctggccgcctttgccagtggcgaggacattcacaaggccacggctgcc
gaagtattcggcgtgacactggagcaggtgacgagcgatcagcgccgcgcagccaaggcc
atcaacttcggcctgatctacggcatgagcgcctttggcctcgcggcccagctggacatc
gaacgtagcgccgcccagcaatacatcgaccgctacttcatgcgctaccccggtgtggcc
gattacatgcagcgcactcgcgaaaccgcgcgcgaacagggctatgtggaaaccgtattc
ggccgtcgcctgtatctgccggaaatcaagctatccaacccggcccgccgcgccggggcc
gaacgtgccgccatcaatgcgccgatgcaaggcaccgccgccgacctgatcaagctggcg
atgattgccgtgcagcactggctggatgcacaaaagctttccagcctgctgatcatgcag
gtacacgatgaactggtgctggaagtgccggacgccgagctggaactggtgaaacagcag
ctgccgcaaatcatggcaggtgtggcgcaactcaaggtgccactgctggcggaagtgggt
gccggtagcagctgggaagccgcccactaa

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