Aquitalea sp. USM4: DKK66_12555
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Entry
DKK66_12555 CDS
T05865
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DKK66_12555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqs03400
]
DKK66_12555
Enzymes [BR:
aqs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DKK66_12555
DNA repair and recombination proteins [BR:
aqs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DKK66_12555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBJ78834
UniProt:
A0A4P6TJE3
LinkDB
All DBs
Position
complement(2712534..2713382)
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AA seq
282 aa
AA seq
DB search
MNRSRFIQQAMGLGPIWESREGWFTDHPAEITRHALIQASHDKAMAELHHLETAAPAIPE
PAAQASAASLPSQQDSQLPVLPATALPDAEVDALDHLPDWEQLEQNVANCERCTLCRTRT
QTVFGRGNPQARWMLIGEAPGEHEDRQGEPFVGKAGQLLDNMLAAAGLDRDRDVYIANVL
KCRPPGNRNPVPEEILACQGYLQQQIQHVQPVLIVALGRFAVQTLLQSEQTIGKLRGQVH
QYQGIPLIATYHPAYLLRNLPDKAKAWQDMVLAKKTYVQQAG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcagccgtttcatccagcaagccatgggcctgggccccatctgggaatcccgc
gagggctggttcaccgatcatccggcagaaattaccaggcatgcactgatacaagccagc
cacgacaaggccatggccgagctgcatcatctggaaacggcagcaccagccatacccgaa
ccagcagcacaggcgtcagcagccagcttaccgtcgcagcaggacagccagctgccagta
ttgccagccactgcattgcccgatgccgaagtcgatgcactcgaccacctgcccgactgg
gagcaactggaacagaacgttgccaattgcgaacgctgcaccctgtgccgcacgcgcacc
cagaccgtatttggtcgtggtaatccccaggcacgctggatgctgattggcgaagctccc
ggagagcacgaggacaggcaaggtgaaccctttgtcggcaaggccgggcagctgctggac
aatatgctggccgccgctggtctggatcgcgaccgtgatgtctacattgccaacgtcctt
aaatgccgcccgccgggcaaccgcaacccggtaccagaggaaatcctggcctgccagggc
tatctgcaacaacagattcagcacgtccagccggtgctgattgtggcgctggggcgcttt
gccgtgcagaccctgctgcaaagcgaacaaaccattggcaaactgcgcggccaggttcac
cagtaccaaggcattccgctgattgccacctatcacccggcttacctgctacgcaatctg
cctgacaaggccaaggcatggcaggacatggtgctggccaaaaaaacctatgtgcagcag
gctggctga
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