Aquitalea sp. USM4: DKK66_13035
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Entry
DKK66_13035 CDS
T05865
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs00541
Biosynthesis of various nucleotide sugars
aqs01100
Metabolic pathways
aqs01250
Biosynthesis of nucleotide sugars
Module
aqs_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DKK66_13035 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aqs01005
]
DKK66_13035 (rfaD)
Enzymes [BR:
aqs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DKK66_13035 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
aqs01005
]
Core region
DKK66_13035 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
DapB_N
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QBJ78924
UniProt:
A0A4P6TJK9
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All DBs
Position
2819661..2820656
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AA seq
331 aa
AA seq
DB search
MTIVVTGAAGFIGSNIVKALNARGITDIIAVDNLTSGDKFRNLVDCEISHYLDKHDFLNL
LLEGEYEGEISAILHQGACSDTMNHDGKYMMDNNYQYTLALFDYCQHEEIQFLFASSAAT
YGKGTIFKEERQYEGPLNVYGYSKFLFDQVLRQRMKEGLSAQAVGFRYFNVYGPQEQHKG
RMASVAFHNFNQYREHGKVKLFGSNDGWGNGMQSRDFVSVEDVVKVNLYFLDNPGKSGIF
NLGSGRAQPFNDVAVSTVNACRRHEGKPALSLDELVAQGIIEYIDFPEALKGKYQSFTQA
DIGKLRDAGYSAPMLTVEQGVDRYVDWLISR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgtggtgaccggcgcagccggctttattggttccaatatcgtcaaggcgctc
aatgcgcgtggcattaccgacatcattgcggtagacaatctcacgtcgggtgacaagttc
cgtaatctggtggactgcgaaatctcccattacctggacaagcatgatttcctgaatctg
ctgctggaaggcgagtacgagggcgagatcagcgccatcctgcatcagggggcctgttcc
gacaccatgaatcacgacggcaagtacatgatggacaacaactatcagtacacgctggcc
ctgttcgattactgtcagcacgaggaaatccagttcctgtttgcctccagtgcggccacc
tacggcaagggcaccatcttcaaggaagaacgccagtacgaaggcccgctcaatgtctac
ggctattccaagttcctgttcgaccaggtgctgcgccagcgcatgaaagaaggcctgtcg
gcccaggcggtgggattccgctatttcaatgtctacggcccgcaagagcagcacaaggga
cgcatggcctcggtagccttccacaacttcaaccagtaccgtgaacacggcaaggtcaag
ctgtttggcagcaatgacggctggggcaatggcatgcaaagccgggactttgtttcggtg
gaagatgtggtcaaggtcaacctgtatttcctggacaatccgggcaagagcggtatcttc
aacctgggttccggtcgcgcccaaccgttcaatgacgttgcggtgtccaccgtcaatgcc
tgccgtcgccacgaaggcaagccggcactgagcctggacgaactggtagcccagggcatc
atcgagtacatcgacttcccggaagcactgaagggcaaataccagagctttacccaggcc
gatatcggcaagctgcgcgatgccggttacagcgcgcccatgctgacggtagagcagggc
gttgatcgttacgtagactggctgatcagccgctaa
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