Aquitalea sp. USM4: DKK66_13825
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Entry
DKK66_13825 CDS
T05865
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aqs
Aquitalea sp. USM4
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aqs03016
]
DKK66_13825
Enzymes [BR:
aqs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DKK66_13825
Transfer RNA biogenesis [BR:
aqs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DKK66_13825
Prokaryotic type
DKK66_13825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QBJ79063
UniProt:
A0A4P6TQ37
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All DBs
Position
3000842..3001765
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AA seq
307 aa
AA seq
DB search
MSKPRSNRRQIDGVLLIDKPYDISSNNALQKARWLLNAAKAGHTGVLDPLATGLLPMCLG
EATKFSSYLLDADKGYRATVRFGAATSTGDIEGEVVRECPIAFDETRLLQVMQQFVGEIS
QVPPMYSALKHQGKPLYEYAREGIEIVREPRNITIHSLRLVSFDGVEAVIDVLCSKGTYI
RTLAEDIAIALDCAAHLTGLRRTTTGGFQLAEAHTLADVEALDMAGREALLLPVDVLVQH
FPAHTLDAASVGRFIHGQAVRFVGECARMTRFRVYSDVDAEFLGLAELRDDDMLHPIRLL
AVKQAAC
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgcgcagcaaccgccgccagattgatggcgtgctgctgatcgacaagccc
tacgatatttccagcaacaacgcgctgcaaaaggcgcgctggttgcttaatgccgccaag
gcagggcataccggcgtgctggacccgctggccaccggcctgttgccgatgtgcctgggg
gaggccaccaagttttcctcctatctgctggatgccgacaagggctatcgcgccaccgta
cgctttggtgccgccaccagtacgggggacatcgaaggtgaagtggtgcgcgaatgcccg
attgcctttgatgaaacccgcctgctgcaagtgatgcagcagtttgtcggcgagatcagc
caggtgccgccgatgtattcggcgctcaagcaccagggcaagcccttgtacgaatatgcg
cgcgaaggtatcgagatagtacgggagccgcgcaacatcaccattcactcgctccgactg
gtcagctttgatggtgtggaagcggtaatcgacgtgctgtgcagcaagggtacctatatc
cgcacgctggccgaagacattgccattgcgctggattgtgccgcccatctgaccggtttg
cgtcgtacaacgactggtggtttccagctggccgaggcgcacacgctggccgatgtggaa
gcgctggacatggctggtcgcgaagcgctgctgttgccggtcgacgtattggtgcaacac
tttccggcgcatacgctggatgcggccagcgtcgggcgttttattcacggacaagccgtg
cgttttgtcggcgagtgtgcgagaatgacgcgctttcgtgtttacagcgatgtggatgcg
gagtttctgggtctggccgagttgcgggatgatgacatgctgcacccgatcagactcctg
gctgtcaaacaggcagcctgctag
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