Aquitalea sp. USM4: DKK66_14110
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Entry
DKK66_14110 CDS
T05865
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs03030
DNA replication
aqs03430
Mismatch repair
aqs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DKK66_14110
03430 Mismatch repair
DKK66_14110
03440 Homologous recombination
DKK66_14110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqs03032
]
DKK66_14110
03400 DNA repair and recombination proteins [BR:
aqs03400
]
DKK66_14110
Enzymes [BR:
aqs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DKK66_14110
DNA replication proteins [BR:
aqs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DKK66_14110
DNA repair and recombination proteins [BR:
aqs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DKK66_14110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QBJ79116
LinkDB
All DBs
Position
complement(3064515..3065123)
Genome browser
AA seq
202 aa
AA seq
DB search
MLGNLKRQWQRRMLKDPRYASLFVDDTQEVVSVDCETTSLKVQEAELLSIGAVKLRGNRI
LSSQSFYVLVKPTRKLESRNISIHGLRPMDVSEGLDADDAVRQLLDFIGGRPLVGYYLEY
DVAVLNKYVRGITGISLPNRQIEVSGRYYDYKFKQNPGAYIDLRLAELIADLQVPALPRH
DALNDAITAGMLYLALKQRGFG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcaatctcaaacgccagtggcagcgccgcatgctgaaagacccgcgctatgcc
agcctgtttgtcgatgacacgcaggaggtggtgagcgtggattgcgaaaccaccagcctg
aaagtgcaggaagccgagctgttgtcgattggcgcggtgaagctgcgcggcaaccgcatc
ctgtccagccagtctttttatgtgctggtcaaacccacgcgcaagctggaaagccgcaat
atcagcattcacgggctgcggcccatggatgtgtcggaaggtctggatgctgacgacgcg
gtacggcaattgctggacttcatcggcgggcggccgctggtgggctattacctggaatac
gatgtggccgtgctcaacaaatatgtgcgcggcatcaccggcatcagcctgcccaaccgg
cagatcgaagtctccggccgctattacgactacaagttcaagcaaaaccccggtgcctac
atcgacctgcggctggccgagctgattgctgacctgcaagtaccggccctgccgcgtcac
gatgcgctcaacgacgccattaccgccggcatgctgtacctggccttgaaacagcgcggt
tttggctga
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